RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SPNS3Q6ZMD2 512 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 PAQR9Q6ZVX9 377 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 TRILQ7L0X0 811 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 DOK1Q99704 481 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 P4HTMQ9NXG6 502 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 DLG5Q8TDM6 1919 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 IGHV3-20A0A0C4DH32 117 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 PRSS1P07477 247 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 ICAM2P13598 275 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 GJA4P35212 333 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 RAG2P55895 527 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 HIST3H3Q16695 136 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 C12orf73Q69YU5 71 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 BPIFA4PQ86YQ2 179 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 SLC26A10Q8NG04 563 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 CRYGNQ8WXF5 182 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 LTBP3Q9NS15 1303 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 MYO9BQ13459 2157 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 SERPINE3A8MV23 424 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 FCMRO60667 390 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 INHBBP09529 407 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 OR1L4Q8NGR5 311 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 OR2T6Q8NHC8 308 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 RGP1Q92546 391 aaPredicted RBP8.83□□□□□ -1
COL4A6-201ENST00000334504 TMEFF2Q9UIK5 374 aaPredicted RBP8.83□□□□□ -1
COL4A6-201ENST00000334504 KCND3Q9UK17 655 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 F11P03951 625 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 ADAMTSL4Q6UY14 1074 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 SLC25A26Q70HW3 274 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 ZDHHC23Q8IYP9 409 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 OR1L3Q8NH93 324 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 BOD1Q96IK1 185 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 A4GNTQ9UNA3 340 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 AMDHD2Q9Y303 409 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 OR51B4Q9Y5P0 310 aa8.83□□□□□ -1
COL4A6-201ENST00000334504 KCPQ6ZWJ8 1503 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 HOXC13P31276 330 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 SSX1Q16384 188 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 OR10G4Q8NGN3 311 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 OR10G9Q8NGN4 311 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 OR10G7Q8NGN6 311 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 NEIL1Q96FI4 390 aaPredicted RBP8.82□□□□□ -1
COL4A6-201ENST00000334504 TBX15Q96SF7 602 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 ADAT1Q9BUB4 502 aaKnown RBP8.82□□□□□ -1
COL4A6-201ENST00000334504 SRD5A3Q9H8P0 318 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 C20orf141Q9NUB4 165 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 A0A1W2PNR3 127 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 CRXO43186 299 aaPredicted RBP8.82□□□□□ -1
COL4A6-201ENST00000334504 TCL1AP56279 114 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 PNRC1Q12796 327 aaPredicted RBP8.82□□□□□ -1
COL4A6-201ENST00000334504 LYPD8Q6UX82 237 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 TMEM116Q8NCL8 245 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 TMED3Q9Y3Q3 217 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 ZNF785A8K8V0 405 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 BCL3P20749 454 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 PRDX4Q13162 271 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 SLC35E4Q6ICL7 350 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 ZNF880Q6PDB4 577 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 DTD1Q8TEA8 209 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 CLDN23Q96B33 292 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 POM121L2Q96KW2 1035 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 RNF2Q99496 336 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 TXNIPQ9H3M7 391 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 MED29Q9NX70 200 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 MTFP1Q9UDX5 166 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 TIMP1P01033 207 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 IGHA1P01876 353 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 IGHA2P01877 340 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 KLHDC9Q8NEP7 349 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 PARD6GQ9BYG4 376 aaPredicted RBP8.82□□□□□ -1
COL4A6-201ENST00000334504 NAV1Q8NEY1 1877 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 OR5B21A6NL26 309 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 TMPRSS11DO60235 418 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 ZNF865P0CJ78 1059 aaPredicted RBP8.82□□□□□ -1
COL4A6-201ENST00000334504 RNF224P0DH78 156 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 SHBQ15464 509 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 GABRA6Q16445 453 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 NKG7Q16617 165 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 SCGB1D4Q6XE38 83 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 OR4C12Q96R67 309 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 HDAC8Q9BY41 377 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 LAT2Q9GZY6 243 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 RASL12Q9NYN1 266 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 PRSS50Q9UI38 385 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 ARFGEF2Q9Y6D5 1785 aa8.82□□□□□ -1
COL4A6-201ENST00000334504 HPXP02790 462 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 DYNLT3P51808 116 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 TMEM33P57088 247 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 ZXDAP98168 799 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 IL13RA2Q14627 380 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 FDX2Q6P4F2 183 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 SLC25A43Q8WUT9 341 aaPredicted RBP8.81□□□□□ -1
COL4A6-201ENST00000334504 ROBO4Q8WZ75 1007 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 RAB33BQ9H082 229 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 AAMDCQ9H7C9 122 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 SIRT5Q9NXA8 310 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 MYH9P35579 1960 aaKnown RBP8.81□□□□□ -1
COL4A6-201ENST00000334504 TCRBV5S1A1TA0A578 114 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 GABRA1P14867 456 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 COMPP49747 757 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms