RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 MARCH1Q8TCQ1 289 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 LRRC29Q8WV35 223 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 FAM212BQ9NTI7 297 aaPredicted RBP13.32□□□□□ -0.28
C9orf47-201ENST00000334490 RPH3ALQ9UNE2 315 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 COPS3Q9UNS2 423 aa13.32□□□□□ -0.28
C9orf47-201ENST00000334490 PCP4L1A6NKN8 68 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 XRCC3O43542 346 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 DNPH1O43598 174 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 TBPP20226 339 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 ACAA2P42765 397 aaKnown RBP13.31□□□□□ -0.28
C9orf47-201ENST00000334490 PTGFRP43088 359 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 GSK3AP49840 483 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 MAMSTRQ6ZN01 415 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 COMMD5Q9GZQ3 224 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 NTMQ9P121 344 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 SDK2Q58EX2 2172 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 A8MXE2 369 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 ZNF14P17017 642 aaPredicted RBP13.31□□□□□ -0.28
C9orf47-201ENST00000334490 DCTDP32321 178 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 CLDN20P56880 219 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 KRBOX4Q5JUW0 171 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 ALKAL2Q6UX46 152 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 LIN37Q96GY3 246 aaPredicted RBP13.31□□□□□ -0.28
C9orf47-201ENST00000334490 TGIF2Q9GZN2 237 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 ZNF275Q9NSD4 429 aaPredicted RBP13.31□□□□□ -0.28
C9orf47-201ENST00000334490 SLC39A9Q9NUM3 307 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 OSGIN2Q9Y236 505 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 CKAP5Q14008 2032 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 C3orf80F5H4A9 247 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 BGLAPP02818 100 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 CT45A6P0DMU7 189 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 CT45A5P0DMU8 189 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 CT45A7P0DMV0 189 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 ZNF17P17021 662 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 ZNF266Q14584 549 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 INSL4Q14641 139 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 OPCMLQ14982 345 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 PLPPR5Q32ZL2 321 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 CT45A1Q5HYN5 189 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 C20orf196Q8IYI0 205 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 CT45A3Q8NHU0 189 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 FAM213BQ8TBF2 198 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 RAB1BQ9H0U4 201 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 GPR35Q9HC97 309 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 KLK11Q9UBX7 282 aa13.31□□□□□ -0.28
C9orf47-201ENST00000334490 POM121CA8CG34 1229 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 MASP2O00187 686 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 AQP8O94778 261 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 NGFP01138 241 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 FGF9P31371 208 aaPredicted RBP13.3□□□□□ -0.28
C9orf47-201ENST00000334490 BTG1P62324 171 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 ZNF85Q03923 595 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 RFESDQ8TAC1 157 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 TUBAL3A6NHL2 446 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 ASAH1Q13510 395 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 TMEM268Q5VZI3 342 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 LIN7CQ9NUP9 197 aaKnown RBP13.3□□□□□ -0.28
C9orf47-201ENST00000334490 NBASA2RRP1 2371 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 TMEM127O75204 238 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 IGLV3-19P01714 112 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 C1QCP02747 245 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 PPP3CBP16298 524 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 INPP5JQ15735 1006 aaPredicted RBP13.3□□□□□ -0.28
C9orf47-201ENST00000334490 CDONQ4KMG0 1287 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 FBXW9Q5XUX1 488 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 GMPPAQ96IJ6 420 aaPredicted RBP13.3□□□□□ -0.28
C9orf47-201ENST00000334490 UQCC2Q9BRT2 126 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 ZNF436Q9C0F3 470 aaPredicted RBP13.3□□□□□ -0.28
C9orf47-201ENST00000334490 GNB4Q9HAV0 340 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 C16orf97H3BN30 126 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 PRSS23O95084 383 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 RPL11P62913 178 aaKnown RBP13.3□□□□□ -0.28
C9orf47-201ENST00000334490 PNLIPRP3Q17RR3 467 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 HIKESHIQ53FT3 197 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 ATP1A1-AS1Q5TC04 95 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 C8orf82Q6P1X6 216 aaPredicted RBP13.3□□□□□ -0.28
C9orf47-201ENST00000334490 OR1S2Q8NGQ3 325 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 OR5H6Q8NGV6 325 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 RTN4IP1Q8WWV3 396 aaPredicted RBP13.3□□□□□ -0.28
C9orf47-201ENST00000334490 ZNF385AQ96PM9 386 aaKnown RBP13.3□□□□□ -0.28
C9orf47-201ENST00000334490 ARPC5LQ9BPX5 153 aa13.3□□□□□ -0.28
C9orf47-201ENST00000334490 MRM2Q9UI43 246 aaKnown RBP13.3□□□□□ -0.28
C9orf47-201ENST00000334490 ZNF883P0CG24 379 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 HLA-DOBP13765 273 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 PEA15Q15121 130 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 PTP4A1Q93096 173 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 C4orf51C9J302 202 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 DLL1O00548 723 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 TSPAN2O60636 221 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 ACSM4P0C7M7 580 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 GUCA2AQ02747 115 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 SUMF2Q8NBJ7 301 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 OR8B12Q8NGG6 310 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 OR8U1Q8NH10 309 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 TIAF1O95411 115 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 NGFRP08138 427 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 SPINK2P20155 84 aa13.29□□□□□ -0.28
C9orf47-201ENST00000334490 DAZAP1Q96EP5 407 aaKnown RBP13.29□□□□□ -0.28
C9orf47-201ENST00000334490 TINAGL1Q9GZM7 467 aaPredicted RBP13.29□□□□□ -0.28
C9orf47-201ENST00000334490 ONECUT1Q9UBC0 465 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms