RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 PPP3CBP16298 524 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 GPM6AP51674 278 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 EFNB2P52799 333 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 CLLU1Q5K131 121 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 OR2T2Q6IF00 324 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 OR2AK2Q8NG84 335 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 ADAT3Q96EY9 351 aaPredicted RBP8.41□□□□□ -1.06
SS18L1-201ENST00000331758 NECAP2Q9NVZ3 263 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 ZNF230Q9UIE0 474 aaPredicted RBP8.41□□□□□ -1.06
SS18L1-201ENST00000331758 HELZP42694 1942 aaKnown RBP8.41□□□□□ -1.06
SS18L1-201ENST00000331758 A0A1B0GUH1 482 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 ZNF891A8MT65 544 aaPredicted RBP8.41□□□□□ -1.06
SS18L1-201ENST00000331758 AGPAT2O15120 278 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 NKX2-8O15522 239 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 RAMP1O60894 148 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 FBXO24O75426 580 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 WNT11O96014 354 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 OR5H8P0DN80 308 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 NAT2P11245 290 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 S100A2P29034 98 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 SLC6A1P30531 599 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 SMUG1Q53HV7 270 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 TSPO2Q5TGU0 170 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 PPP1R32Q7Z5V6 425 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 OSR2Q8N2R0 312 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 ARHGEF39Q8N4T4 335 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 OR1J1Q8NGS3 322 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 SLC39A7Q92504 469 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 SPSB1Q96BD6 273 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 RTL8AQ9BWD3 113 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 ASF1BQ9NVP2 202 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 FOXJ2Q9P0K8 574 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 GHRLQ9UBU3 117 aa8.41□□□□□ -1.06
SS18L1-201ENST00000331758 A0A0B4J2A0 478 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 PIN1P1O15428 100 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 ZNHIT1O43257 154 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 TTRP02766 147 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 GIPP09681 153 aaPredicted RBP8.4□□□□□ -1.06
SS18L1-201ENST00000331758 FUT6P51993 359 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 CDCP2Q5VXM1 449 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 LRRTM1Q86UE6 522 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 ZNF687Q8N1G0 1237 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 CD300LFQ8TDQ1 290 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 HGDQ93099 445 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 C1orf123Q9NWV4 160 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 GNG12Q9UBI6 72 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 SHPKQ9UHJ6 478 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 KIF25Q9UIL4 384 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 PCNX2A6NKB5 2137 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 PMS2P1A4D2B8 440 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 IFNA5P01569 189 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 CRYAAP02489 173 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 SP1P08047 785 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 S100A11P31949 105 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 EDDM3BP56851 147 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 RPS27AP62979 156 aaKnown RBP8.4□□□□□ -1.06
SS18L1-201ENST00000331758 UBA52P62987 128 aaKnown RBP8.4□□□□□ -1.06
SS18L1-201ENST00000331758 MZT1Q08AG7 82 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 AADACL3Q5VUY0 350 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 SUMF1Q8NBK3 374 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 OR4D6Q8NGJ1 314 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 NMNAT2Q9BZQ4 307 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 ENY2Q9NPA8 101 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.4□□□□□ -1.063e-6■■□□□ 13.5
SS18L1-201ENST00000331758 CUL9Q8IWT3 2517 aa8.4□□□□□ -1.06
SS18L1-201ENST00000331758 SIRPB1O00241 398 aa8.4□□□□□ -1.07
SS18L1-201ENST00000331758 ZNF354AO60765 605 aaPredicted RBP8.4□□□□□ -1.07
SS18L1-201ENST00000331758 OMGP23515 440 aa8.4□□□□□ -1.07
SS18L1-201ENST00000331758 HOXA6P31267 233 aa8.4□□□□□ -1.07
SS18L1-201ENST00000331758 CAMK2BQ13554 666 aa8.4□□□□□ -1.07
SS18L1-201ENST00000331758 ST3GAL2Q16842 350 aa8.4□□□□□ -1.07
SS18L1-201ENST00000331758 MRPL14Q6P1L8 145 aaKnown RBP8.4□□□□□ -1.07
SS18L1-201ENST00000331758 LINC00114Q6XXX2 140 aa8.4□□□□□ -1.07
SS18L1-201ENST00000331758 C6orf201Q7Z4U5 140 aa8.4□□□□□ -1.07
SS18L1-201ENST00000331758 TMEM251Q8N6I4 163 aa8.4□□□□□ -1.07
SS18L1-201ENST00000331758 WDSUB1Q8N9V3 476 aa8.4□□□□□ -1.07
SS18L1-201ENST00000331758 NFAM1Q8NET5 270 aaPredicted RBP8.4□□□□□ -1.07
SS18L1-201ENST00000331758 KLHDC3Q9BQ90 382 aa8.4□□□□□ -1.07
SS18L1-201ENST00000331758 TTTY12Q9BZ98 90 aa8.4□□□□□ -1.07
SS18L1-201ENST00000331758 ZFP57Q9NU63 452 aa8.4□□□□□ -1.07
SS18L1-201ENST00000331758 FANCMQ8IYD8 2048 aa8.4□□□□□ -1.07
SS18L1-201ENST00000331758 IGLV3-12A0A075B6K2 115 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 CD300LBA8K4G0 201 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 TRAF3IP2O43734 574 aaPredicted RBP8.39□□□□□ -1.07
SS18L1-201ENST00000331758 NDUFB6O95139 128 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 PMP22Q01453 160 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 ZNF468Q5VIY5 522 aaPredicted RBP8.39□□□□□ -1.07
SS18L1-201ENST00000331758 TFAP2EQ6VUC0 442 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 ZNF573Q86YE8 665 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 ZNF519Q8TB69 540 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 DDA1Q9BW61 102 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 SLC17A5Q9NRA2 495 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 SLC23A1Q9UHI7 598 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 ZNF407Q9C0G0 2248 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 LYPD3O95274 346 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 ADRB1P08588 477 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 HIST1H1DP16402 221 aaKnown RBP8.39□□□□□ -1.07
SS18L1-201ENST00000331758 MRPS34P82930 218 aaKnown RBP8.39□□□□□ -1.07
SS18L1-201ENST00000331758 TEX261Q6UWH6 196 aa8.39□□□□□ -1.07
SS18L1-201ENST00000331758 TMEM229BQ8NBD8 167 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms