RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 CECR9P0C854 216 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 SLC6A1P30531 599 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 GDNFP39905 211 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 SSC4DQ8WTU2 575 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 WFIKKN1Q96NZ8 548 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 MMP28Q9H239 520 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 AUNIPQ9H7T9 357 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 RAB22AQ9UL26 194 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 USP9XQ93008 2570 aaPredicted RBP16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 ORC5O43913 435 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 PRF1P14222 555 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 AP3S2P59780 193 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 KLF9Q13886 244 aaPredicted RBP16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 TBC1D28Q2M2D7 210 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 WFDC8Q8IUA0 241 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 OR52I2Q8NH67 350 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 LRRC46Q96FV0 321 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 REEP6Q96HR9 211 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 NKX3-1Q99801 234 aaPredicted RBP16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 CHST5Q9GZS9 411 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 ATG5Q9H1Y0 275 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 KCNK15Q9H427 330 aa16.17■□□□□ 0.18
EXOSC3-201ENST00000327304 M0R1B8 84 aa16.16■□□□□ 0.18
EXOSC3-201ENST00000327304 GSTT2BP0CG30 244 aa16.16■□□□□ 0.18
EXOSC3-201ENST00000327304 PPP3CBP16298 524 aa16.16■□□□□ 0.18
EXOSC3-201ENST00000327304 WNT5AP41221 380 aa16.16■□□□□ 0.18
EXOSC3-201ENST00000327304 SRP9P49458 86 aaKnown RBP16.16■□□□□ 0.18
EXOSC3-201ENST00000327304 BIVMQ86UB2 503 aa16.16■□□□□ 0.18
EXOSC3-201ENST00000327304 SEMA6DQ8NFY4 1073 aa16.16■□□□□ 0.18
EXOSC3-201ENST00000327304 C1QTNF5Q9BXJ0 243 aa16.16■□□□□ 0.18
EXOSC3-201ENST00000327304 NPDC1Q9NQX5 325 aaPredicted RBP16.16■□□□□ 0.18
EXOSC3-201ENST00000327304 PIGLQ9Y2B2 252 aa16.16■□□□□ 0.18
EXOSC3-201ENST00000327304 IGKV1-9A0A0C4DH69 117 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 HCKP08631 526 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 RNF224P0DH78 156 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 QRFPP83859 136 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 RNASE12Q5GAN4 147 aaKnown RBP16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 C1QTNF12Q5T7M4 302 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 AGAP6Q5VW22 663 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 COLCA1Q6ZS62 124 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 DEDD2Q8WXF8 326 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 MARVELD1Q9BSK0 173 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 CDH20Q9HBT6 801 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 MOV10Q9HCE1 1003 aaKnown RBP16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 ETAA1Q9NY74 926 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 NLKQ9UBE8 527 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 HCFC1P51610 2035 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 XRCC2O43543 280 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 SCGNO76038 276 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 SORDQ00796 357 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 PLA1AQ53H76 456 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 RAB12Q6IQ22 244 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 OR2W3Q7Z3T1 314 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 ANGPTL5Q86XS5 388 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 ZNF101Q8IZC7 436 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 LINC01560Q8TB33 94 aa16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 AKAP1Q92667 903 aaKnown RBP eCLIP16.15■□□□□ 0.18
EXOSC3-201ENST00000327304 ANKHD1Q8IWZ3 2542 aaKnown RBP16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 TRAV18A0A075B6X5 111 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 MEIOCA2RUB1 952 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 METTL21EPA6NDL7 271 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 KDM4BO94953 1096 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 NGFP01138 241 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 UBBP0CG47 229 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 FAHP16930 419 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 BTCP35070 178 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 RIPPLY1Q0D2K3 151 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 SNTB2Q13425 540 aaKnown RBP16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 AWAT2Q6E213 333 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 RFPL4BQ6ZWI9 263 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 SPSB4Q96A44 273 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 CREB3L1Q96BA8 519 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 OR51B6Q9H340 312 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 DPAGT1Q9H3H5 408 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 COPZ2Q9P299 210 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 GHRLQ9UBU3 117 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 DOPEY1Q5JWR5 2465 aa16.14■□□□□ 0.17
EXOSC3-201ENST00000327304 IGHV2OR16-5A0A0B4J2B6 119 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 ANKRD20A5PA0PJZ0 165 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 NAP1L6A6NFF2 107 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 TMEM14DPA8MWL7 114 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 SULT1C2O00338 296 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 VSIG8P0DPA2 414 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 ZNF35P13682 527 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 CALCRP30988 508 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 ALDH3B1P43353 468 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 NAAAQ02083 359 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 SSBP1Q04837 148 aaKnown RBP16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 UBE2V2Q15819 145 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 C3orf36Q3SXR2 165 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 PNLDC1Q8NA58 520 aaKnown RBP16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 OR2AE1Q8NHA4 323 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 GCDHQ92947 438 aaPredicted RBP16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 ITFG2Q969R8 447 aa16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 NUDT16L1Q9BRJ7 211 aaKnown RBP16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 MRPS28Q9Y2Q9 187 aaKnown RBP16.13■□□□□ 0.17
EXOSC3-201ENST00000327304 H7C417 338 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 RBBP9O75884 186 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 PRSS3P35030 304 aa16.12■□□□□ 0.17
EXOSC3-201ENST00000327304 GSK3AP49840 483 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms