RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 PRDM6Q9NQX0 595 aa19.56■□□□□ 0.72
PNKP-201ENST00000322344 TMEM38BQ9NVV0 291 aa19.56■□□□□ 0.72
PNKP-201ENST00000322344 OSGIN2Q9Y236 505 aa19.56■□□□□ 0.72
PNKP-201ENST00000322344 MRPS18CQ9Y3D5 142 aaKnown RBP19.56■□□□□ 0.72
PNKP-201ENST00000322344 SYNGR3O43761 229 aa19.55■□□□□ 0.72
PNKP-201ENST00000322344 SCO1O75880 301 aa19.55■□□□□ 0.72
PNKP-201ENST00000322344 SERPINF1P36955 418 aa19.55■□□□□ 0.72
PNKP-201ENST00000322344 C1orf210Q8IVY1 113 aa19.55■□□□□ 0.72
PNKP-201ENST00000322344 OR13G1Q8NGZ3 307 aa19.55■□□□□ 0.72
PNKP-201ENST00000322344 PIGTQ969N2 578 aa19.55■□□□□ 0.72
PNKP-201ENST00000322344 ZNF837Q96EG3 531 aaPredicted RBP19.55■□□□□ 0.72
PNKP-201ENST00000322344 ST6GALNAC5Q9BVH7 336 aa19.55■□□□□ 0.72
PNKP-201ENST00000322344 PPA2Q9H2U2 334 aa19.55■□□□□ 0.72
PNKP-201ENST00000322344 MBD2Q9UBB5 411 aa19.55■□□□□ 0.72
PNKP-201ENST00000322344 ZNF716A6NP11 495 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 MASP2O00187 686 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 STARP49675 285 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 SSPNQ14714 243 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 SURF2Q15527 256 aaPredicted RBP19.54■□□□□ 0.72
PNKP-201ENST00000322344 SNAI3Q3KNW1 292 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 SULF2Q8IWU5 870 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 GALNT11Q8NCW6 608 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 OR1F12Q8NHA8 337 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 RHBDD1Q8TEB9 315 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 ZNF471Q9BX82 626 aaPredicted RBP19.54■□□□□ 0.72
PNKP-201ENST00000322344 DNTTIP1Q9H147 329 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 COLQQ9Y215 455 aaPredicted RBP19.54■□□□□ 0.72
PNKP-201ENST00000322344 TRBV6-7A0A0A0MS04 114 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 A0A0G2JMM0 328 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 A0A1W2PPB8 328 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 A0A1W2PRS3 328 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 KIR3DP1A8MWS1 328 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 LUMP51884 338 aaPredicted RBP19.54■□□□□ 0.72
PNKP-201ENST00000322344 ZXDAP98168 799 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 Q0VFX4 171 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 ATXN7L3Q14CW9 347 aaPredicted RBP19.54■□□□□ 0.72
PNKP-201ENST00000322344 ABLIM2Q6H8Q1 611 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 C6orf15Q6UXA7 325 aaPredicted RBP19.54■□□□□ 0.72
PNKP-201ENST00000322344 AAED1Q7RTV5 226 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 DTX1Q86Y01 620 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 OR5AP2Q8NGF4 316 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 OR10K1Q8NGX5 313 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 OR2V1Q8NHB1 315 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 DMRTA2Q96SC8 542 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 ARPC5LQ9BPX5 153 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 ZPBPQ9BS86 351 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 C1QTNF6Q9BXI9 259 aa19.54■□□□□ 0.72
PNKP-201ENST00000322344 ELL3Q9HB65 397 aaPredicted RBP19.54■□□□□ 0.72
PNKP-201ENST00000322344 CCDC187A0A096LP49 1063 aa19.53■□□□□ 0.72
PNKP-201ENST00000322344 C13orf42A0A1B0GVH6 325 aa19.53■□□□□ 0.72
PNKP-201ENST00000322344 PRKACBP22694 351 aa19.53■□□□□ 0.72
PNKP-201ENST00000322344 ECI1P42126 302 aa19.53■□□□□ 0.72
PNKP-201ENST00000322344 CNN3Q15417 329 aaKnown RBP19.53■□□□□ 0.72
PNKP-201ENST00000322344 CLEC18BQ6UXF7 455 aa19.53■□□□□ 0.72
PNKP-201ENST00000322344 GUCD1Q96NT3 240 aa19.53■□□□□ 0.72
PNKP-201ENST00000322344 RTBDNQ9BSG5 229 aaPredicted RBP19.53■□□□□ 0.72
PNKP-201ENST00000322344 WDR13Q9H1Z4 485 aa19.53■□□□□ 0.72
PNKP-201ENST00000322344 CRLF2Q9HC73 371 aa19.53■□□□□ 0.72
PNKP-201ENST00000322344 EHFQ9NZC4 300 aa19.53■□□□□ 0.72
PNKP-201ENST00000322344 ZNF391Q9UJN7 358 aa19.53■□□□□ 0.72
PNKP-201ENST00000322344 SPEF1Q9Y4P9 236 aa19.53■□□□□ 0.72
PNKP-201ENST00000322344 LRRC3CA6NJW4 275 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 SERPINA7P05543 415 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 TCN2P20062 427 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 RPS18P62269 152 aaKnown RBP19.52■□□□□ 0.72
PNKP-201ENST00000322344 CHRFAM7AQ494W8 412 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 DMRTC1Q5HYR2 192 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 ACER2Q5QJU3 275 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 AADACL3Q5VUY0 350 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 MOB3CQ70IA8 216 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 GALNTL5Q7Z4T8 443 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 ESX1Q8N693 406 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 EMG1Q92979 244 aaKnown RBP19.52■□□□□ 0.72
PNKP-201ENST00000322344 REEP6Q96HR9 211 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 ADGRG7Q96K78 797 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 METTL9Q9H1A3 318 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 LOXL2Q9Y4K0 774 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 CXCL13O43927 109 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 KRTAP27-1Q3LI81 207 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 RIPPLY2Q5TAB7 128 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 RELL2Q8NC24 303 aaPredicted RBP19.52■□□□□ 0.72
PNKP-201ENST00000322344 CT55Q8WUE5 264 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 ZNF775Q96BV0 537 aaPredicted RBP19.52■□□□□ 0.72
PNKP-201ENST00000322344 Q96M66 194 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 GPR173Q9NS66 373 aa19.52■□□□□ 0.72
PNKP-201ENST00000322344 OR6C6A6NF89 314 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 MTCP1P56278 107 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 PLEKHN1Q494U1 663 aaPredicted RBP19.51■□□□□ 0.71
PNKP-201ENST00000322344 ZNF774Q6NX45 483 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 PLXDC2Q6UX71 529 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 CSAG2Q9Y5P2 127 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 VCANP13611 3396 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 TRIOBPQ9H2D6 2365 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 KIAA1549Q9HCM3 1950 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 FIGNL2A6NMB9 653 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 RRP8O43159 456 aaKnown RBP19.51■□□□□ 0.71
PNKP-201ENST00000322344 TMEM225BP0DP42 221 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 PCBD1P61457 104 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 OR10D3Q8NH80 312 aa19.51■□□□□ 0.71
PNKP-201ENST00000322344 RGCCQ9H4X1 137 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms