RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 PTPN13Q12923 2485 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF92Q03936 586 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 TNFRSF9Q07011 255 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 MICBQ29980 383 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 LRRC18Q8N456 261 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM104Q8NE00 496 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 SLC26A10Q8NG04 563 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 COL4A1P02462 1669 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 HSPB6O14558 160 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 MYOGP15173 224 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 TCN2P20062 427 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 PSMB5P28074 263 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 PTGER4P35408 488 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 WASP42768 502 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 BPIFB3P59826 476 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM156Q8N614 296 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 OR5AU1Q8NGC0 362 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 NANOS1Q8WY41 292 aaKnown RBP6.36□□□□□ -1.39
SMC1A-201ENST00000322213 GSX1Q9H4S2 264 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-201ENST00000322213 CUTCQ9NTM9 273 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 MARCH5Q9NX47 278 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 LSM2Q9Y333 95 aaKnown RBP6.36□□□□□ -1.39
SMC1A-201ENST00000322213 MBLAC1A4D2B0 266 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-201ENST00000322213 ICOSLGO75144 302 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 OPN1LWP04000 364 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 C9orf131Q5VYM1 1079 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 RTN4IP1Q8WWV3 396 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-201ENST00000322213 WDR92Q96MX6 357 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 RCL1Q9Y2P8 373 aaKnown RBP6.36□□□□□ -1.39
SMC1A-201ENST00000322213 YTHDF2Q9Y5A9 579 aaKnown RBP6.36□□□□□ -1.39
SMC1A-201ENST00000322213 ENTPD2Q9Y5L3 495 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 A0A1W2PNV4 684 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 FCN1O00602 326 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 PMCHP20382 165 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 BIDP55957 195 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 HLA-DRB3P79483 266 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 IKZF1Q13422 519 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 PAQR9Q6ZVX9 377 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM40Q8WWA1 233 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 NRIP2Q9BQI9 281 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 ADAT1Q9BUB4 502 aaKnown RBP6.36□□□□□ -1.39
SMC1A-201ENST00000322213 BANF2Q9H503 90 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF816-ZNF321PA0A0X1KG74 233 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 CFDP00746 253 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-201ENST00000322213 GNG4P50150 75 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 FIGLAQ6QHK4 219 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 OR2D3Q8NGH3 330 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 RPS4Y2Q8TD47 263 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 ARSGQ96EG1 525 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 B4GALT7Q9UBV7 327 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 MPGP29372 298 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 OR4A47Q6IF82 309 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 ADAMTSL4Q6UY14 1074 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 CYHR1Q6ZMK1 362 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF765Q7L2R6 523 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 HAO2Q9NYQ3 351 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 CHEK1O14757 476 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 XRCC2O43543 280 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 ETHE1O95571 254 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 IRS1P35568 1242 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 CNN1P51911 297 aaKnown RBP6.36□□□□□ -1.39
SMC1A-201ENST00000322213 MVDP53602 400 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM97Q5BJF2 176 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 H2BFWTQ7Z2G1 175 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 C17orf47Q8NEP4 570 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 TIMM29Q9BSF4 260 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 S1PR5Q9H228 398 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 RBPJLQ9UBG7 517 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 WNT6Q9Y6F9 365 aa6.36□□□□□ -1.39
SMC1A-201ENST00000322213 GEMIN2O14893 280 aaKnown RBP6.35□□□□□ -1.39
SMC1A-201ENST00000322213 PRAMEF4O60810 478 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 GAPDHP04406 335 aaKnown RBP6.35□□□□□ -1.39
SMC1A-201ENST00000322213 WNT3P56703 355 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 DUSP5Q16690 384 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 HIST3H3Q16695 136 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 ARIH2OSQ8N7S6 290 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 DHCR7Q9UBM7 475 aaKnown RBP6.35□□□□□ -1.39
SMC1A-201ENST00000322213 PISDQ9UG56 409 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 HRASP01112 189 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 STAG3L2P0CL84 134 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 CLDN2P57739 230 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 RPL27P61353 136 aaKnown RBP6.35□□□□□ -1.39
SMC1A-201ENST00000322213 FFAR4Q5NUL3 377 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 LHFPL2Q6ZUX7 228 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 MTURNQ8N3F0 131 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 OR52N4Q8NGI2 321 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 CST5P28325 142 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-201ENST00000322213 CSNK1G2P78368 415 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM268Q5VZI3 342 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 MED25Q71SY5 747 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 GJC3Q8NFK1 279 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 DMBX1Q8NFW5 382 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 ADAMTS5Q9UNA0 930 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 LIPGQ9Y5X9 500 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 C5orf52A6NGY3 159 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 KIAA1324LA8MWY0 1029 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-201ENST00000322213 TBX19O60806 448 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 IGHV2-70P01814 119 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 HPXP02790 462 aa6.35□□□□□ -1.39
SMC1A-201ENST00000322213 DAOP14920 347 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms