RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SLC26A1Q9H2B4 701 aa15.26■□□□□ 0.03
COL9A1-201ENST00000320755 PLEKHJ1Q9NW61 149 aa15.26■□□□□ 0.03
COL9A1-201ENST00000320755 ZNF581Q9P0T4 197 aa15.26■□□□□ 0.03
COL9A1-201ENST00000320755 SPRY1O43609 319 aaPredicted RBP15.26■□□□□ 0.03
COL9A1-201ENST00000320755 LIFP15018 202 aa15.26■□□□□ 0.03
COL9A1-201ENST00000320755 CCL1P22362 96 aa15.26■□□□□ 0.03
COL9A1-201ENST00000320755 MTCP1P56278 107 aa15.26■□□□□ 0.03
COL9A1-201ENST00000320755 AIMP2Q13155 320 aaKnown RBP15.26■□□□□ 0.03
COL9A1-201ENST00000320755 VAX1Q5SQQ9 334 aa15.26■□□□□ 0.03
COL9A1-201ENST00000320755 LHFPL5Q8TAF8 219 aa15.26■□□□□ 0.03
COL9A1-201ENST00000320755 PROK2Q9HC23 129 aa15.26■□□□□ 0.03
COL9A1-201ENST00000320755 COX6A1P12074 109 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 LSM6P62312 80 aaKnown RBP15.25■□□□□ 0.03
COL9A1-201ENST00000320755 AADACL3Q5VUY0 350 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 CRIP3Q6Q6R5 217 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 TFAP2EQ6VUC0 442 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 NAT6Q93015 286 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 C9J4A7 227 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 KLF7O75840 302 aaPredicted RBP15.25■□□□□ 0.03
COL9A1-201ENST00000320755 SERPINA5P05154 406 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 RRADP55042 308 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 RPS18P62269 152 aaKnown RBP15.25■□□□□ 0.03
COL9A1-201ENST00000320755 PNLIPRP3Q17RR3 467 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 DRAM2Q6UX65 266 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 C20orf196Q8IYI0 205 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 EIF4E3Q8N5X7 224 aaKnown RBP15.25■□□□□ 0.03
COL9A1-201ENST00000320755 NABP1Q96AH0 204 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 PIK3IP1Q96FE7 263 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 PIGQQ9BRB3 760 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 SRXN1Q9BYN0 137 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 NCOR1O75376 2440 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 CD63P08962 238 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 OPRM1P35372 400 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 RAB32Q13637 225 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 TAF9Q16594 264 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 ZNF585AQ6P3V2 769 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 BATF2Q8N1L9 274 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 IMMP1LQ96LU5 166 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 NUDT16L1Q9BRJ7 211 aaKnown RBP15.25■□□□□ 0.03
COL9A1-201ENST00000320755 LDAHQ9H6V9 325 aa15.25■□□□□ 0.03
COL9A1-201ENST00000320755 MCTS1Q9ULC4 181 aaKnown RBP15.25■□□□□ 0.03
COL9A1-201ENST00000320755 NSG1A0A0A6YYJ2 146 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 A0A0G2JMM0 328 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 A0A1W2PPB8 328 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 A0A1W2PRS3 328 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 FAM74A7A6NL05 159 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 KIR3DP1A8MWS1 328 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 GLI4P10075 376 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 FAM74A3Q4VXF1 159 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 MARC2Q969Z3 335 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 NECAB3Q96P71 396 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-201ENST00000320755 SLC39A1Q9NY26 324 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 FAM221AA4D161 298 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 ATP6V1G2-DDX39BF2Z307 99 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 TRIM77I1YAP6 450 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 ZNHIT1O43257 154 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 PRF1P14222 555 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 NAT1P18440 290 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 FPR2P25090 351 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 DSCR4P56555 118 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-201ENST00000320755 CYCSP99999 105 aaKnown RBP15.24■□□□□ 0.03
COL9A1-201ENST00000320755 ACTBL2Q562R1 376 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 ZNF774Q6NX45 483 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 SGK3Q96BR1 496 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 ALKBH3Q96Q83 286 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-201ENST00000320755 NAA11Q9BSU3 229 aaPredicted RBP15.24■□□□□ 0.03
COL9A1-201ENST00000320755 TMEM231Q9H6L2 316 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 CRLF2Q9HC73 371 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 PILRBQ9UKJ0 227 aa15.24■□□□□ 0.03
COL9A1-201ENST00000320755 DHRS7CA6NNS2 312 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 EIF1BO60739 113 aaKnown RBP15.23■□□□□ 0.03
COL9A1-201ENST00000320755 PDGFBP01127 241 aaPredicted RBP15.23■□□□□ 0.03
COL9A1-201ENST00000320755 LCATP04180 440 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 ACKR3P25106 362 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 PDCD1Q15116 288 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 MAML2Q8IZL2 1156 aaPredicted RBP15.23■□□□□ 0.03
COL9A1-201ENST00000320755 FAM89BQ8N5H3 189 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 ZIC4Q8N9L1 334 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 AGBL5Q8NDL9 886 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 AKR7LQ8NHP1 331 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 SSC4DQ8WTU2 575 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 FAAP24Q9BTP7 215 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 NMES1Q9C002 83 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 FAM117AQ9C073 453 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 PRELID1Q9Y255 219 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 LOC102725191A0A1B0GVB3 256 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 TRAPPC6AO75865 159 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 FGF5P12034 268 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 NR2C1P13056 603 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 TPT1P13693 172 aaKnown RBP15.23■□□□□ 0.03
COL9A1-201ENST00000320755 B4GALT1P15291 398 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 THBS4P35443 961 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 ZNF84P51523 738 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 BAP18Q8IXM2 172 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 TMEM123Q8N131 208 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 OR14L1PQ8NHC6 308 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 DYRK2Q92630 601 aa15.23■□□□□ 0.03
COL9A1-201ENST00000320755 ZNF2Q9BSG1 426 aaPredicted RBP15.23■□□□□ 0.03
COL9A1-201ENST00000320755 ADAT1Q9BUB4 502 aaKnown RBP15.23■□□□□ 0.03
COL9A1-201ENST00000320755 ANGPTL4Q9BY76 406 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms