RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 OR2M2Q96R28 347 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 TMEM38BQ9NVV0 291 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 SHISA8B8ZZ34 492 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 E9PI62 339 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 AQP7O14520 342 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 ZIC3O60481 467 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 FAM87AP0C7U9 286 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 TGM1P22735 817 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 INPP5JQ15735 1006 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 FBXW9Q5XUX1 488 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 STX12Q86Y82 276 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 SLC35G3Q8N808 338 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 PRSS33Q8NF86 280 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 OR13D1Q8NGV5 346 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 DERL3Q96Q80 235 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 ALKBH3Q96Q83 286 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 C1RLQ9NZP8 487 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 ATG2AQ2TAZ0 1938 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 ERVH48-1M5A8F1 160 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF354AO60765 605 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 ZFPL1O95159 310 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 CPN1P15169 458 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 PCSK6P29122 969 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 ZBTB37Q5TC79 503 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 FAM3DQ96BQ1 224 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 ITPKCQ96DU7 683 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 RAB3CQ96E17 227 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 SELENOIQ9C0D9 397 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 ISG20L2Q9H9L3 353 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 RNF150Q9ULK6 438 aa7.55□□□□□ -1.2
PDLIM5-201ENST00000317968 LGALS8O00214 317 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 F2RL2O00254 374 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 AMY2AP04746 511 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 ALDH3B1P43353 468 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 TAS2R20P59543 309 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 TFAP2EQ6VUC0 442 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 STAC2Q6ZMT1 411 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 FAM214BQ7L5A3 538 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF554Q86TJ5 538 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 GALNT11Q8NCW6 608 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 ZPLD1Q8TCW7 415 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 RPEQ96AT9 228 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 CNTNAP3BQ96NU0 1288 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 GPR35Q9HC97 309 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 INMT-MINDY4F8WBC2 141 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 TBPP20226 339 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 BLVRBP30043 206 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 CD79BP40259 229 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 GPR12P47775 334 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 EVX1P49640 407 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 TLE1Q04724 770 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 OR51F2Q8NH61 342 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 SNRNP200O75643 2136 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF736B4DX44 427 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 TUSC2O75896 110 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 EPXP11678 715 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 FSTP19883 344 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 SSTR2P30874 369 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 TAS2R19P59542 299 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 WDR38Q5JTN6 314 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 DESI1Q6ICB0 168 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 RBMXL3Q8N7X1 1067 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 OR10J5Q8NHC4 309 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 HTRA1Q92743 480 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 NARFLQ9H6Q4 476 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 DLL4Q9NR61 685 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 GPR173Q9NS66 373 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 KLK13Q9UKR3 277 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 LYRM1O43325 122 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 ISG15P05161 165 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 AKAIN1P0CW23 69 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF708P17019 499 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 TBR1Q16650 682 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 METTL11BQ5VVY1 283 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 ABLIM2Q6H8Q1 611 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 Q6ZTK2 550 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 CCDC190Q86UF4 302 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 CATSPERDQ86XM0 798 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 C17orf78Q8N4C9 275 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 TMEM54Q969K7 222 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 SPRY4Q9C004 299 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 AKIP1Q9NQ31 210 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 NECAP2Q9NVZ3 263 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 GOLGB1Q14789 3259 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 PCNX2A6NKB5 2137 aa7.54□□□□□ -1.2
PDLIM5-201ENST00000317968 A0A0U1RQV5 110 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 DHRS3O75911 302 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 THBS3P49746 956 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 FMODQ06828 376 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 TCF15Q12870 199 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 ALKBH6Q3KRA9 238 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 FAM57AQ8TBR7 257 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 PTX4Q96A99 478 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 FGGYQ96C11 551 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 THAP7Q9BT49 309 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 GPR84Q9NQS5 396 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 CYB5R1Q9UHQ9 305 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 NUBP2Q9Y5Y2 271 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 IL7P13232 177 aa7.53□□□□□ -1.2
PDLIM5-201ENST00000317968 TGIF1Q15583 401 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms