RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PBOV1Q9GZY1 135 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 WDR54Q9H977 334 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 OR14J1Q9UGF5 321 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 PURGQ9UJV8 347 aaKnown RBP7.93□□□□□ -1.14
COL6A5-202ENST00000312481 SCRG1O75711 98 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 MRGPRGQ86SM5 289 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 ATP5SQ99766 215 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF724A8MTY0 619 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 BCAT2O15382 392 aaPredicted RBP7.93□□□□□ -1.14
COL6A5-202ENST00000312481 MBTPS2O43462 519 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 OGFOD3Q6PK18 319 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 UBAC2Q8NBM4 344 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 COPS9Q8WXC6 57 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 CDC42EP3Q9UKI2 254 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 MMP17Q9ULZ9 603 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 CHST2Q9Y4C5 530 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 CCDC187A0A096LP49 1063 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 LAIR1Q6GTX8 287 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 C19orf48Q6RUI8 117 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 WWTR1Q9GZV5 400 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 A8MUA0 341 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 SFT2D2O95562 160 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 KLF9Q13886 244 aaPredicted RBP7.93□□□□□ -1.14
COL6A5-202ENST00000312481 SLC9A3R2Q15599 337 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 TMEM179BQ7Z7N9 219 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 ARSGQ96EG1 525 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 GINS3Q9BRX5 216 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 SMIM30A4D0T7 59 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 NXPH2O95156 264 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 ZFPL1O95159 310 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 CFDP00746 253 aaPredicted RBP7.93□□□□□ -1.14
COL6A5-202ENST00000312481 GCGP01275 180 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 OMGP23515 440 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 EXOSC7Q15024 291 aaKnown RBP7.93□□□□□ -1.14
COL6A5-202ENST00000312481 TMEM176BQ3YBM2 270 aaPredicted RBP7.93□□□□□ -1.14
COL6A5-202ENST00000312481 LINC01559Q495D7 138 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 CST9LP1Q5W188 147 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 GTF2H5Q6ZYL4 71 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 C20orf196Q8IYI0 205 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 SAXO1Q8IYX7 474 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 KLK6Q92876 244 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 LHX4Q969G2 390 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 TM7SF3Q9NS93 570 aa7.93□□□□□ -1.14
COL6A5-202ENST00000312481 SIRT3Q9NTG7 399 aaPredicted RBP7.93□□□□□ -1.14
COL6A5-202ENST00000312481 KIAA1549Q9HCM3 1950 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 A0A0A6YYC8 382 aaPredicted RBP7.92□□□□□ -1.14
COL6A5-202ENST00000312481 I3L1I5 382 aaPredicted RBP7.92□□□□□ -1.14
COL6A5-202ENST00000312481 PMP2P02689 132 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 ZBTB25P24278 435 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 CXCL12P48061 93 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 AKR1C1Q04828 323 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 DBX2Q6ZNG2 339 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 PPP1R3EQ9H7J1 279 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 Q9N2K0 584 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 SPANXA1Q9NS26 97 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 CYTIPO60759 359 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 NDUFS6O75380 124 aaKnown RBP7.92□□□□□ -1.14
COL6A5-202ENST00000312481 CD8AP01732 235 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 CRHP06850 196 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 ATF1P18846 271 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 GPR12P47775 334 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 RHOBP62745 196 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 GNG3P63215 75 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 DNLZQ5SXM8 178 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 FAM58AQ8N1B3 248 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 DTX3Q8N9I9 347 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 OR52N4Q8NGI2 321 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 TSACCQ96A04 125 aaPredicted RBP7.92□□□□□ -1.14
COL6A5-202ENST00000312481 LRIT1Q9P2V4 623 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 GNG12Q9UBI6 72 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 NOSIPQ9Y314 301 aaKnown RBP7.92□□□□□ -1.14
COL6A5-202ENST00000312481 C9orf170A2RU37 121 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 CDRT15L2A8MXV6 281 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF732B4DXR9 585 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 SFTA3P0C7M3 94 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 PRSS56P0CW18 603 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 ALOX5APP20292 161 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF787Q6DD87 383 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 RAB33BQ9H082 229 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 PRKAB1Q9Y478 270 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 TRAF3IP2O43734 574 aaPredicted RBP7.92□□□□□ -1.14
COL6A5-202ENST00000312481 SPCS3P61009 180 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF154Q13106 437 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 KCNMB1Q16558 191 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 CA13Q8N1Q1 262 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 UQCC1Q9NVA1 299 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 TMEM30CPA0ZSE6 113 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 G3V3Q6 166 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 TXNL1O43396 289 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 CLN5O75503 358 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 SRP9P49458 86 aaKnown RBP7.92□□□□□ -1.14
COL6A5-202ENST00000312481 SECTM1Q8WVN6 248 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 KCNK15Q9H427 330 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 CALHM2Q9HA72 323 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 RASL12Q9NYN1 266 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 VSX1Q9NZR4 365 aaPredicted RBP7.92□□□□□ -1.14
COL6A5-202ENST00000312481 NAT8Q9UHE5 227 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 ZNF223Q9UK11 482 aaPredicted RBP7.92□□□□□ -1.14
COL6A5-202ENST00000312481 ANKRD34CP0C6C1 535 aa7.92□□□□□ -1.14
COL6A5-202ENST00000312481 CCNOP22674 350 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms