RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 LOC400499M0QZD8 3231 aa11.26□□□□□ -0.61
RETREG3-201ENST00000309428 A0A1B0GX78 115 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 MSGN1A6NI15 193 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 MLF1P58340 268 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 RPL27P61353 136 aaKnown RBP11.25□□□□□ -0.61
RETREG3-201ENST00000309428 MRPS34P82930 218 aaKnown RBP11.25□□□□□ -0.61
RETREG3-201ENST00000309428 CFHR1Q03591 330 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 LINC01590Q5TEZ4 76 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 OR6S1Q8NH40 331 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 TERB2Q8NHR7 220 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF2Q9BSG1 426 aaPredicted RBP11.25□□□□□ -0.61
RETREG3-201ENST00000309428 C7orf77A4D0Y5 90 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 RER1O15258 196 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 MBTPS2O43462 519 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 IFNA4P05014 189 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 S100A8P05109 93 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 RPS4Y1P22090 263 aaKnown RBP11.25□□□□□ -0.61
RETREG3-201ENST00000309428 G0S2P27469 103 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 CHATP28329 748 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 RAB5CP51148 216 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 INSM1Q01101 510 aaPredicted RBP11.25□□□□□ -0.61
RETREG3-201ENST00000309428 FUT7Q11130 342 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF141Q15928 474 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 TAF9Q16594 264 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 C21orf62-AS1Q17RA5 79 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 SYT13Q7L8C5 426 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 PRSS35Q8N3Z0 413 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 HOXB13Q92826 284 aaPredicted RBP11.25□□□□□ -0.61
RETREG3-201ENST00000309428 GFI1Q99684 422 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 TOLLIPQ9H0E2 274 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 SLCO5A1Q9H2Y9 848 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF160Q9HCG1 818 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 SLC5A6Q9Y289 635 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 RCL1Q9Y2P8 373 aaKnown RBP11.25□□□□□ -0.61
RETREG3-201ENST00000309428 ARPC3O15145 178 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 ANGPTL7O43827 346 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 IL33O95760 270 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 FHITP49789 147 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 OR8U1Q8NH10 309 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 ASB17Q8WXJ9 295 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 ARHGAP5-AS1Q96IT6 56 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 NRIP2Q9BQI9 281 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 OCSTAMPQ9BR26 566 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 ESRP2Q9H6T0 727 aaKnown RBP11.25□□□□□ -0.61
RETREG3-201ENST00000309428 FBXL17Q9UF56 701 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 MED13LQ71F56 2210 aa11.25□□□□□ -0.61
RETREG3-201ENST00000309428 TRAV14DV4A0A0A6YYC5 116 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 MPTX1A8MV57 137 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 SOCS1O15524 211 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 HSPA12AO43301 675 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 TLX3O43711 291 aaPredicted RBP11.24□□□□□ -0.61
RETREG3-201ENST00000309428 RAMP1O60894 148 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 DDAH2O95865 285 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 SRFP11831 508 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF43P17038 809 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 KIR3DL2P43630 455 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 CCL7P80098 99 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 MFAP5Q13361 173 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 GUK1Q16774 197 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 BEND4Q6ZU67 534 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 PIK3IP1Q96FE7 263 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 MEGF10Q96KG7 1140 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 LURAP1Q96LR2 239 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 IP6K3Q96PC2 410 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 MMP26Q9NRE1 261 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 PLEK2Q9NYT0 353 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 KPTNQ9Y664 436 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 CUL9Q8IWT3 2517 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 THADAQ6YHU6 1953 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 PHF1O43189 567 aaPredicted RBP11.24□□□□□ -0.61
RETREG3-201ENST00000309428 DBHP09172 617 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 CLDN17P56750 224 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 CDCP2Q5VXM1 449 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 GPX8Q8TED1 209 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 POM121Q96HA1 1249 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 PHF7Q9BWX1 381 aaPredicted RBP11.24□□□□□ -0.61
RETREG3-201ENST00000309428 GPR84Q9NQS5 396 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 LANCL2Q9NS86 450 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 OCIAD1Q9NX40 245 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 ZNF724A8MTY0 619 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 CDRT15L2A8MXV6 281 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 TSTD3H0UI37 97 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 SULT2B1O00204 365 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 CYB5BO43169 146 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 CYTIPO60759 359 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 CST7O76096 145 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 CCL4P13236 92 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 FABP4P15090 132 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 B2MP61769 119 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 RAP1AP62834 184 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 PABPC1L2AQ5JQF8 200 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 RPUSD3Q6P087 351 aaKnown RBP11.24□□□□□ -0.61
RETREG3-201ENST00000309428 SLC36A1Q7Z2H8 476 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 RNF144BQ7Z419 303 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 FRZBQ92765 325 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 LIN37Q96GY3 246 aaPredicted RBP11.24□□□□□ -0.61
RETREG3-201ENST00000309428 SHANK1Q9Y566 2161 aa11.24□□□□□ -0.61
RETREG3-201ENST00000309428 PRR19A6NJB7 356 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 A8MVM7 634 aa11.23□□□□□ -0.61
RETREG3-201ENST00000309428 RAB11AP62491 216 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms