RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 MRTO4Q9UKD2 239 aaKnown RBP4.29□□□□□ -1.72
CKS1B-201ENST00000308987 CLEC4AQ9UMR7 237 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 NPIPA1Q9UND3 350 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 PPIEQ9UNP9 301 aaKnown RBP4.29□□□□□ -1.72
CKS1B-201ENST00000308987 ADAM18Q9Y3Q7 739 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 DSCAMO60469 2012 aa4.29□□□□□ -1.72
CKS1B-201ENST00000308987 A0A1B0GTI1 187 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 A0A1W2PPK0 400 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 A0A1W2PQD3 144 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 TMEM72A0PK05 275 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 RAB19A4D1S5 217 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 NKX2-6A6NCS4 301 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 SYNDIG1LA6NDD5 238 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 MPTX1A8MV57 137 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 TEX46H3BTG2 121 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 TOR1AO14656 332 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ABCD4O14678 606 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 MAGEB4O15481 346 aaPredicted RBP4.28□□□□□ -1.72
CKS1B-201ENST00000308987 DOK2O60496 412 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 EIF4E2O60573 245 aaKnown RBP4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CTAG2O75638 210 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CDC123O75794 336 aaPredicted RBP4.28□□□□□ -1.72
CKS1B-201ENST00000308987 TSPAN9O75954 239 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 TOXO94900 526 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 NSA2O95478 260 aaKnown RBP4.28□□□□□ -1.72
CKS1B-201ENST00000308987 IL33O95760 270 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 MT-ATP6P00846 226 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CD74P04233 296 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CD2P06729 351 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 LPLP06858 475 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 HEXBP07686 556 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 OR8G3PP0DMU2 310 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CT45A8P0DMV1 189 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CT45A9P0DMV2 189 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ANXA7P20073 488 aaKnown RBP4.28□□□□□ -1.72
CKS1B-201ENST00000308987 TBPP20226 339 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 MPGP29372 298 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 PPICP45877 212 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 MAP2K6P52564 334 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CTXN1P60606 82 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 DCAF7P61962 342 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ID2Q02363 134 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CD69Q07108 199 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 SKP2Q13309 424 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 MEF2DQ14814 521 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 OR1C1Q15619 314 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 PCGF3Q3KNV8 242 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ALG10Q5BKT4 473 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CT45A2Q5DJT8 189 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 C1orf100Q5SVJ3 147 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ABHD17BQ5VST6 288 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF660Q6AZW8 331 aaPredicted RBP4.28□□□□□ -1.72
CKS1B-201ENST00000308987 OR5M10Q6IEU7 315 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 RAB12Q6IQ22 244 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 STEAP1BQ6NZ63 245 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 MTFR2Q6P444 385 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 KCTD18Q6PI47 426 aaPredicted RBP4.28□□□□□ -1.72
CKS1B-201ENST00000308987 NPSR1Q6W5P4 371 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CHMP1BQ7LBR1 199 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 GALNTL5Q7Z4T8 443 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CPEB2Q7Z5Q1 589 aaKnown RBP4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ANKRD37Q7Z713 158 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF679Q8IYX0 411 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 GABRG1Q8N1C3 465 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 KCNRGQ8N5I3 272 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 C12orf45Q8N5I9 185 aaPredicted RBP4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF614Q8N883 585 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF615Q8N8J6 731 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 OR6M1Q8NGM8 313 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 OR9A4Q8NGU2 314 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 OTOSQ8NHW6 89 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 RNF128Q8TEB7 428 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ZNRF4Q8WWF5 429 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ST8SIA4Q92187 359 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 TMEM106AQ96A25 262 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 FAM3DQ96BQ1 224 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 RASD2Q96D21 266 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 MMABQ96EY8 250 aaPredicted RBP4.28□□□□□ -1.72
CKS1B-201ENST00000308987 Q96M85 177 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 DGAT2Q96PD7 388 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 OR8B4Q96RC9 309 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 INTS14Q96SY0 518 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 NUDT16L1Q9BRJ7 211 aaKnown RBP4.28□□□□□ -1.72
CKS1B-201ENST00000308987 GINS4Q9BRT9 223 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CHIAQ9BZP6 476 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 LAT2Q9GZY6 243 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 MFFQ9GZY8 342 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ARL6Q9H0F7 186 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CXXC4Q9H2H0 198 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 CDCP1Q9H5V8 836 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 BEX1Q9HBH7 125 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 ZC4H2Q9NQZ6 224 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 LANCL2Q9NS86 450 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 SLC2A8Q9NY64 477 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 RASL12Q9NYN1 266 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 MRPL15Q9P015 296 aaKnown RBP4.28□□□□□ -1.72
CKS1B-201ENST00000308987 GRHPRQ9UBQ7 328 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 KCNK7Q9Y2U2 307 aa4.28□□□□□ -1.72
CKS1B-201ENST00000308987 USF3Q68DE3 2245 aa4.27□□□□□ -1.73
CKS1B-201ENST00000308987 ABCA1O95477 2261 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms