RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 IGHV4-34P06331 123 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 NME2P22392 152 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 SLC38A9Q8NBW4 561 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 LGALS14Q8TCE9 139 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 NEIL1Q96FI4 390 aaPredicted RBP7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 PRDM7Q9NQW5 492 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 CMC2Q9NRP2 79 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 GAB2Q9UQC2 676 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 E5RGE8 158 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 LGALS7P47929 136 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 NCCRP1Q6ZVX7 275 aaPredicted RBP7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 MRGPREQ86SM8 312 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 GHSRQ92847 366 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 FAM90A27PA6NNH2 459 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 PRSS44E7EML9 344 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 NCR1O76036 304 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 RAB5AP20339 215 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 LINC00299Q6ZSB3 139 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 TMPRSS11FQ6ZWK6 438 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 C11orf42Q8N5U0 333 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 PNPLA1Q8N8W4 532 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 OR1L1Q8NH94 360 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 MZB1Q8WU39 189 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 PIGMQ9H3S5 423 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 GPR173Q9NS66 373 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 SLAMF8Q9P0V8 285 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 PRSS37A4D1T9 235 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 PPP1R2P9O14990 202 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 CRXO43186 299 aaPredicted RBP7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 TMIGD3P0DMS9 266 aaPredicted RBP7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 HYAL4Q2M3T9 481 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 SPANXN5Q5MJ07 72 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 STUMQ69YW2 141 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 OR10K2Q6IF99 312 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 SAP25Q8TEE9 199 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 PELI1Q96FA3 418 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 MMP28Q9H239 520 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 NXPH3O95157 252 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 GUSBP08236 651 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 FCARP24071 287 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 SOX18P35713 384 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 ZNF620Q6ZNG0 422 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 ASCL5Q7RTU5 278 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 C8orf44Q96CB5 159 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 GABARAPL1Q9H0R8 117 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 GAL3ST2Q9H3Q3 398 aa7.48□□□□□ -1.21
PCDHB1-201ENST00000306549 A0A1W2PN81 502 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 PTBP1P26599 531 aaKnown RBP eCLIP7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 CHRNA7P36544 502 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 TMEM267Q0VDI3 215 aaPredicted RBP7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 GTDC1Q4AE62 458 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 HSD17B11Q8NBQ5 300 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 RASD2Q96D21 266 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 C1RLQ9NZP8 487 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 A0A087WUJ7 227 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 TRBV4-1A0A0J9YWV2 114 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 ZNF816-ZNF321PA0A0X1KG74 233 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 GDNFP39905 211 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 ZNF574Q6ZN55 896 aaPredicted RBP7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 FA2HQ7L5A8 372 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 C10orf35Q96D05 121 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 MYEOVQ96EZ4 313 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 ARL2-SNX15V9GYD0 113 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 CYR61O00622 381 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 TGOLN2O43493 480 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 JTBO76095 146 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 PDGFBP01127 241 aaPredicted RBP7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 KIR2DS2P43631 304 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 OXA1LQ15070 435 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 TMEM97Q5BJF2 176 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 PLAC9Q5JTB6 97 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 OR13G1Q8NGZ3 307 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 SCARF2Q96GP6 870 aaPredicted RBP7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 DDOQ99489 341 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 TAF9BQ9HBM6 251 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 COA3Q9Y2R0 106 aaPredicted RBP7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 FLVCR1Q9Y5Y0 555 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 CHD3Q12873 2000 aaKnown RBP7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 NPIPB8E9PQR5 432 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 PTGER1P34995 402 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 FUT7Q11130 342 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 ZNF141Q15928 474 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 LYPD4Q6UWN0 246 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 RBPMS2Q6ZRY4 209 aaKnown RBP7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 NUP37Q8NFH4 326 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 ROBO4Q8WZ75 1007 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 LPAR3Q9UBY5 353 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 OR5V1Q9UGF6 321 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 TNFSF11O14788 317 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 SOD1P00441 154 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 RBP4P02753 201 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 SRMP19623 302 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 IGFBP6P24592 240 aaPredicted RBP7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 INSM1Q01101 510 aaPredicted RBP7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 P2RY6Q15077 328 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 GSG1Q2KHT4 349 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 PRICKLE4Q2TBC4 344 aa7.47□□□□□ -1.21
PCDHB1-201ENST00000306549 FBXL17Q9UF56 701 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms