RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 CYTL1Q9NRR1 136 aa11.59□□□□□ -0.55
TRIM35-201ENST00000305364 DOK5Q9P104 306 aa11.59□□□□□ -0.55
TRIM35-201ENST00000305364 RAD51DO75771 328 aa11.59□□□□□ -0.55
TRIM35-201ENST00000305364 SMIM10L1P0DMW3 83 aa11.59□□□□□ -0.55
TRIM35-201ENST00000305364 SCGB1C1Q8TD33 95 aa11.59□□□□□ -0.55
TRIM35-201ENST00000305364 MRPL24Q96A35 216 aaKnown RBP11.59□□□□□ -0.55
TRIM35-201ENST00000305364 SMIM10Q96HG1 83 aa11.59□□□□□ -0.55
TRIM35-201ENST00000305364 ZNF442Q9H7R0 627 aa11.59□□□□□ -0.55
TRIM35-201ENST00000305364 TTC28Q96AY4 2481 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 FAM157CP0CG43 387 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 OR5H8P0DN80 308 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 FOLR1P15328 257 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 BCKDHBP21953 392 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 ZNF41P51814 821 aaPredicted RBP11.58□□□□□ -0.56
TRIM35-201ENST00000305364 DCDP81605 110 aaKnown RBP11.58□□□□□ -0.56
TRIM35-201ENST00000305364 ZNF429Q86V71 674 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 CRIPAKQ8N1N5 446 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 OR5T1Q8NG75 326 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 ASB16Q96NS5 453 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 CXorf65A6NEN9 183 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 ZFP92A6NM28 416 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 ZNF205O95201 554 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 KLK3P07288 261 aaPredicted RBP11.58□□□□□ -0.56
TRIM35-201ENST00000305364 FSTP19883 344 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 P2RY4P51582 365 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 HSD17B7P56937 341 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 PLAURQ03405 335 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 C1orf100Q5SVJ3 147 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 C1orf87Q8N0U7 546 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 ARHGEF39Q8N4T4 335 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 CA5BP1Q8WTZ4 195 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 RTN4IP1Q8WWV3 396 aaPredicted RBP11.58□□□□□ -0.56
TRIM35-201ENST00000305364 C11orf40Q8WZ69 217 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 PTX4Q96A99 478 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 REEP6Q96HR9 211 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 HEATR5AQ86XA9 2040 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 FAM221AA4D161 298 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 CDRT15L2A8MXV6 281 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 CDC14BO60729 498 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 IL33O95760 270 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 S100GP29377 79 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 RBP2P50120 134 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 EGR4Q05215 589 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 GRINAQ7Z429 371 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 OR5B12Q96R08 314 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 GPR61Q9BZJ8 451 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 TBX21Q9UL17 535 aa11.58□□□□□ -0.56
TRIM35-201ENST00000305364 SEMA4FO95754 770 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 HSF1Q00613 529 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 CCDC71LQ8N9Z2 235 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 TSLPQ969D9 159 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 BMFQ96LC9 184 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 OR8U8P0C7N1 319 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 DRD1P21728 446 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 G0S2P27469 103 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 SFTPDP35247 375 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRIM35-201ENST00000305364 H1FNTQ75WM6 255 aaPredicted RBP11.57□□□□□ -0.56
TRIM35-201ENST00000305364 SFTPA2Q8IWL1 248 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 LGI3Q8N145 548 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 DDIT4LQ96D03 193 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 SUSD2Q9UGT4 822 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 GAB2Q9UQC2 676 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 SCN5AQ14524 2016 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 EFEMP2O95967 443 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 FOLR2P14207 255 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 ZNF43P17038 809 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 DUSP1P28562 367 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 SNCAP37840 140 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 SLC37A1P57057 533 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 GABREP78334 506 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 MR1Q95460 341 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 POM121Q96HA1 1249 aa11.57□□□□□ -0.56
TRIM35-201ENST00000305364 KIR2DS5A0A0G2JLQ3 304 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 A0A0G2JNG1 304 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 C9JQL5 133 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 KIR2DS3K7RE56 304 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 HLA-DOBP13765 273 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 EPHA1P21709 976 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 CDX1P47902 265 aaPredicted RBP11.56□□□□□ -0.56
TRIM35-201ENST00000305364 ROM1Q03395 351 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 UNC119Q13432 240 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 KIR2DS5Q14953 304 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 PTCRAQ6ISU1 281 aaPredicted RBP11.56□□□□□ -0.56
TRIM35-201ENST00000305364 MRPL41Q8IXM3 137 aaKnown RBP11.56□□□□□ -0.56
TRIM35-201ENST00000305364 TVP23CQ96ET8 276 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 MAGT1Q9H0U3 335 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 WSB1Q9Y6I7 421 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 H3BQ15 152 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 GPR137BO60478 399 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 PAX6P26367 422 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 GPR3P46089 330 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 MRPS34P82930 218 aaKnown RBP11.56□□□□□ -0.56
TRIM35-201ENST00000305364 FAM3AP98173 230 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 PCK2Q16822 640 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 TSPO2Q5TGU0 170 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 FDX2Q6P4F2 183 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 CMTM1Q8IZ96 169 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 OR13G1Q8NGZ3 307 aa11.56□□□□□ -0.56
TRIM35-201ENST00000305364 HPSE2Q8WWQ2 592 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms