RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 APOBEC1P41238 236 aaKnown RBP9.6□□□□□ -0.87
ZNF558-201ENST00000301475 OR3A2P47893 321 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 MMP16P51512 607 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 SNU13P55769 128 aaKnown RBP9.6□□□□□ -0.87
ZNF558-201ENST00000301475 SLC26A5P58743 744 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 ERVFRD-1P60508 538 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 LSM6P62312 80 aaKnown RBP9.6□□□□□ -0.87
ZNF558-201ENST00000301475 ACY1Q03154 408 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 ARFRP1Q13795 201 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 ELOBQ15370 118 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 RSU1Q15404 277 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 ZNF674Q2M3X9 581 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 DMRTC1Q5HYR2 192 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 SOHLH1Q5JUK2 328 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 OR5AS1Q8N127 324 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 HIST3H2BBQ8N257 126 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 METTL27Q8N6F8 245 aaPredicted RBP9.6□□□□□ -0.87
ZNF558-201ENST00000301475 APCDD1LQ8NCL9 501 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 S100A13Q99584 98 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 TMEM59Q9BXS4 323 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 C1orf123Q9NWV4 160 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 HRASLS2Q9NWW9 162 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 URGCP-MRPS24S4R325 110 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 RPL36A-HNRNPH2H7BZ11 118 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 XRCC2O43543 280 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 F10P00742 488 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 ZNF823P16415 610 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 KLK2P20151 261 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 FCARP24071 287 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 RBMXP38159 391 aaKnown RBP9.6□□□□□ -0.87
ZNF558-201ENST00000301475 DHPSP49366 369 aaPredicted RBP9.6□□□□□ -0.87
ZNF558-201ENST00000301475 TAS2R60P59551 318 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 CSNK2A1P68400 391 aaPredicted RBP9.6□□□□□ -0.87
ZNF558-201ENST00000301475 GGNBP1Q5YKI7 109 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 HSD17B11Q8NBQ5 300 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 CSNK2A3Q8NEV1 391 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 EMG1Q92979 244 aaKnown RBP9.6□□□□□ -0.87
ZNF558-201ENST00000301475 GINS3Q9BRX5 216 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 TGIF2Q9GZN2 237 aa9.6□□□□□ -0.87
ZNF558-201ENST00000301475 ARGFXA6NJG6 315 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 PLRG1O43660 514 aaKnown RBP9.59□□□□□ -0.87
ZNF558-201ENST00000301475 DXOO77932 396 aaKnown RBP9.59□□□□□ -0.87
ZNF558-201ENST00000301475 NUDT14O95848 222 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 SERPINA2P20848 420 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 HAGHQ16775 308 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 AVL9Q8NBF6 648 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 SUMF2Q8NBJ7 301 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 RNF133Q8WVZ7 376 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 CPNE4Q96A23 557 aaPredicted RBP9.59□□□□□ -0.87
ZNF558-201ENST00000301475 RAB39BQ96DA2 213 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 PBOV1Q9GZY1 135 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 RFNGQ9Y644 331 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 IGKV1D-8A0A087WSZ0 117 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 TGIF2-C20orf24A0A0A6YYL0 155 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 SEC14L6B5MCN3 397 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 PLPP3O14495 311 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 NPIPB7O75200 414 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 IGHMP01871 453 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 MBPP02686 304 aaPredicted RBP9.59□□□□□ -0.87
ZNF558-201ENST00000301475 GJA4P35212 333 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 P2RY1P47900 373 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 SUCLG1P53597 346 aaKnown RBP9.59□□□□□ -0.87
ZNF558-201ENST00000301475 CCL20P78556 96 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.59□□□□□ -0.87
ZNF558-201ENST00000301475 OR5D14Q8NGL3 314 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 OR10S1Q8NGN2 331 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 OR51E1Q8TCB6 317 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 PBDC1Q9BVG4 233 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 LAMA1P25391 3075 aa9.59□□□□□ -0.87
ZNF558-201ENST00000301475 A0A087X0M5 115 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 A0A1B0GX30 115 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 H0YL77 283 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 DIRAS3O95661 229 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 MT-ATP6P00846 226 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 HSD11B2P80365 405 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 PLXDC2Q6UX71 529 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 TMEM182Q6ZP80 229 aaPredicted RBP9.58□□□□□ -0.88
ZNF558-201ENST00000301475 MFSD8Q8NHS3 518 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 FAM213BQ8TBF2 198 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 VPS13AQ96RL7 3174 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 CDC14CA4D256 554 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 BTBD17A6NE02 478 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 ZNF587BE7ETH6 402 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 H0YIG0 161 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 H3BQ15 152 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 K7N7A8 449 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 CRTAPO75718 401 aaPredicted RBP9.58□□□□□ -0.88
ZNF558-201ENST00000301475 NSA2O95478 260 aaKnown RBP9.58□□□□□ -0.88
ZNF558-201ENST00000301475 STX12Q86Y82 276 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 KCNG3Q8TAE7 436 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 PLEKHA2Q9HB19 425 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 PRODH2Q9UF12 536 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 C14orf166Q9Y224 244 aaKnown RBP9.58□□□□□ -0.88
ZNF558-201ENST00000301475 C17orf105B2RV13 164 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 PPP1R2P9O14990 202 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 TRGC2P03986 189 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 HPNP05981 417 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 HNRNPA1P09651 372 aaKnown RBP eCLIP9.58□□□□□ -0.88
ZNF558-201ENST00000301475 NFATC4Q14934 902 aa9.58□□□□□ -0.88
ZNF558-201ENST00000301475 CDCP2Q5VXM1 449 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms