RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 OR10A2Q9H208 303 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 SLC26A1Q9H2B4 701 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 PROK2Q9HC23 129 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 IGHV1-45A0A0A0MS14 117 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 RAB19A4D1S5 217 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 F8W036 122 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 TNFSF11O14788 317 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 F12P00748 615 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-204ENST00000300862 CRHP06850 196 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 GSTP1P09211 210 aaKnown RBP11.31□□□□□ -0.6
HIF3A-204ENST00000300862 FCGR2AP12318 317 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 PVALBP20472 110 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-204ENST00000300862 CCL1P22362 96 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 GLRA1P23415 457 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 PSMB6P28072 239 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 BLVRBP30043 206 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-204ENST00000300862 GSK3AP49840 483 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 GRB2P62993 217 aaKnown RBP11.31□□□□□ -0.6
HIF3A-204ENST00000300862 SRSF3P84103 164 aaKnown RBP11.31□□□□□ -0.6
HIF3A-204ENST00000300862 H3F3AP84243 136 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 KCNMB1Q16558 191 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 IGSF11Q5DX21 431 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 GTPBP8Q8N3Z3 284 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-204ENST00000300862 OR56B1Q8NGI3 324 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 OR5H2Q8NGV7 314 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 NPIPA2E9PIF3 369 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 NPIPA3F8WFD2 350 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 ZIC3O60481 467 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 CD63P08962 238 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 ADH6P28332 368 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 SNU13P55769 128 aaKnown RBP11.31□□□□□ -0.6
HIF3A-204ENST00000300862 CSNK2A1P68400 391 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-204ENST00000300862 CLEC18BQ6UXF7 455 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 CSNK2A3Q8NEV1 391 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 OR13G1Q8NGZ3 307 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 MAFAQ8NHW3 353 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-204ENST00000300862 RRNAD1Q96FB5 475 aaKnown RBP11.31□□□□□ -0.6
HIF3A-204ENST00000300862 URM1Q9BTM9 101 aaKnown RBP11.31□□□□□ -0.6
HIF3A-204ENST00000300862 GPR132Q9UNW8 380 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 PIGLQ9Y2B2 252 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 HS3ST3B1Q9Y662 390 aa11.31□□□□□ -0.6
HIF3A-204ENST00000300862 DBX1A6NMT0 343 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 H0YIZ8 118 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 ONECUT2O95948 504 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 COX6A1P12074 109 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 TBPP20226 339 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 RFC3P40938 356 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 OR3A2P47893 321 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 SNAI3Q3KNW1 292 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 ANKRD55Q3KP44 614 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 TMEM128Q5BJH2 165 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 DHRS7BQ6IAN0 325 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-204ENST00000300862 FAHD2BQ6P2I3 314 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-204ENST00000300862 GALNTL5Q7Z4T8 443 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 TMEM156Q8N614 296 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 NAXEQ8NCW5 288 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 OR2AE1Q8NHA4 323 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 SSC4DQ8WTU2 575 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 NABP1Q96AH0 204 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 FAHD2AQ96GK7 314 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 RNF126Q9BV68 326 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 NELFAQ9H3P2 528 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 PLEK2Q9NYT0 353 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 DKKL1Q9UK85 242 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 A0A0B4J2A0 478 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 A0A0J9YW62 118 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 KLF7O75840 302 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-204ENST00000300862 HPNP05981 417 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 KLK3P07288 261 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-204ENST00000300862 PATE4P0C8F1 98 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 LIFP15018 202 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 SUPT4H1P63272 117 aaKnown RBP11.3□□□□□ -0.6
HIF3A-204ENST00000300862 S100A12P80511 92 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 ECH1Q13011 328 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 C10orf91Q5T1B1 145 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 PNLDC1Q8NA58 520 aaKnown RBP11.3□□□□□ -0.6
HIF3A-204ENST00000300862 GJC3Q8NFK1 279 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 OR9K2Q8NGE7 335 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 FBXO17Q96EF6 278 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 IMMP1LQ96LU5 166 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 NUDT16L1Q9BRJ7 211 aaKnown RBP11.3□□□□□ -0.6
HIF3A-204ENST00000300862 RTBDNQ9BSG5 229 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-204ENST00000300862 HDHD3Q9BSH5 251 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-204ENST00000300862 ZNF701Q9NV72 531 aaPredicted RBP11.3□□□□□ -0.6
HIF3A-204ENST00000300862 EHFQ9NZC4 300 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 ZNF581Q9P0T4 197 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 SHPKQ9UHJ6 478 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 AHCTF1Q8WYP5 2266 aa11.3□□□□□ -0.6
HIF3A-204ENST00000300862 IGKV1D-8A0A087WSZ0 117 aa11.29□□□□□ -0.6
HIF3A-204ENST00000300862 A0A0G2JMM0 328 aa11.29□□□□□ -0.6
HIF3A-204ENST00000300862 A0A1W2PPB8 328 aa11.29□□□□□ -0.6
HIF3A-204ENST00000300862 A0A1W2PRS3 328 aa11.29□□□□□ -0.6
HIF3A-204ENST00000300862 PQLC2LA1A4F0 135 aa11.29□□□□□ -0.6
HIF3A-204ENST00000300862 MSGN1A6NI15 193 aa11.29□□□□□ -0.6
HIF3A-204ENST00000300862 KIR3DP1A8MWS1 328 aa11.29□□□□□ -0.6
HIF3A-204ENST00000300862 FGF16O43320 207 aa11.29□□□□□ -0.6
HIF3A-204ENST00000300862 DHHO43323 396 aa11.29□□□□□ -0.6
HIF3A-204ENST00000300862 KNG1P01042 644 aa11.29□□□□□ -0.6
HIF3A-204ENST00000300862 SPP1P10451 314 aa11.29□□□□□ -0.6
HIF3A-204ENST00000300862 GABRR1P24046 479 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms