RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 GRINAQ7Z429 371 aa13.77□□□□□ -0.2
UBAP1-201ENST00000297661 ZNF565Q8N9K5 539 aa13.77□□□□□ -0.2
UBAP1-201ENST00000297661 KDF1Q8NAX2 398 aaPredicted RBP13.77□□□□□ -0.2
UBAP1-201ENST00000297661 OR56B1Q8NGI3 324 aa13.77□□□□□ -0.2
UBAP1-201ENST00000297661 MARCH1Q8TCQ1 289 aa13.77□□□□□ -0.2
UBAP1-201ENST00000297661 THRSPQ92748 146 aa13.77□□□□□ -0.2
UBAP1-201ENST00000297661 S100PBPQ96BU1 408 aa13.77□□□□□ -0.2
UBAP1-201ENST00000297661 FGGYQ96C11 551 aa13.77□□□□□ -0.2
UBAP1-201ENST00000297661 PARP12Q9H0J9 701 aaKnown RBP13.77□□□□□ -0.2
UBAP1-201ENST00000297661 SUSD2Q9UGT4 822 aa13.77□□□□□ -0.2
UBAP1-201ENST00000297661 OR52A1Q9UKL2 312 aa13.77□□□□□ -0.2
UBAP1-201ENST00000297661 IGHV1OR21-1A0A087WYE8 117 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 SLC31A2O15432 143 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 CSTBP04080 98 aaKnown RBP13.77□□□□□ -0.21
UBAP1-201ENST00000297661 GNALP38405 381 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.77□□□□□ -0.21
UBAP1-201ENST00000297661 GAR1Q9NY12 217 aaKnown RBP13.77□□□□□ -0.21
UBAP1-201ENST00000297661 PRR13Q9NZ81 148 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 PPP4R1LQ9P1A2 415 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 OTOGLQ3ZCN5 2332 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 CXorf65A6NEN9 183 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 WIPF3A6NGB9 483 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 PATE3B3GLJ2 98 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 NPIPA5E9PKD4 350 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 LMO7DNF2Z398 122 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 LYL1P12980 280 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 RAB6AP20340 208 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 C1QL4Q86Z23 238 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 CHST4Q8NCG5 386 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 AQP3Q92482 292 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 PTGES2Q9H7Z7 377 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 UCK1Q9HA47 277 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 G6PC2Q9NQR9 355 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 HHLA2Q9UM44 414 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 NPIPA1Q9UND3 350 aa13.77□□□□□ -0.21
UBAP1-201ENST00000297661 A0A0A6YYH2 397 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 A6NJ64 397 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 METTL12A8MUP2 240 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 IFNA6P05013 189 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 IGFBP3P17936 291 aaPredicted RBP13.76□□□□□ -0.21
UBAP1-201ENST00000297661 DCAF7P61962 342 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 FOXK1P85037 733 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 ZNF239Q16600 458 aaKnown RBP13.76□□□□□ -0.21
UBAP1-201ENST00000297661 PHF19Q5T6S3 580 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 BEND4Q6ZU67 534 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 SLC26A10Q8NG04 563 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 C5orf34Q96MH7 638 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 AMDHD2Q9Y303 409 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 R4GMQ9 66 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 ADAM10O14672 748 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 LDLRAD4O15165 306 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 TAS2R60P59551 318 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 RAB32Q13637 225 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 SLC9A3R2Q15599 337 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 FAM69BQ5VUD6 431 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 ZNF248Q8NDW4 579 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 ST7LQ8TDW4 575 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 CPNE4Q96A23 557 aaPredicted RBP13.76□□□□□ -0.21
UBAP1-201ENST00000297661 CNTD2Q9H8S5 307 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 FGF21Q9NSA1 209 aa13.76□□□□□ -0.21
UBAP1-201ENST00000297661 DCHS1Q96JQ0 3298 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 A0A1W2PQD3 144 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 FTCDNL1E5RQL4 147 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 TSPAN15O95858 294 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 SLC2A1P11166 492 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 HIST1H1BP16401 226 aaKnown RBP13.75□□□□□ -0.21
UBAP1-201ENST00000297661 NDUFA6P56556 154 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 RNF4P78317 190 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 REC114Q7Z4M0 266 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 C17orf82Q86X59 251 aaPredicted RBP13.75□□□□□ -0.21
UBAP1-201ENST00000297661 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.75□□□□□ -0.21
UBAP1-201ENST00000297661 OR52N4Q8NGI2 321 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 OR1J1Q8NGS3 322 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 PARPBPQ9NWS1 579 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 STARD10Q9Y365 291 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 CPAMD8Q8IZJ3 1885 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 FAM186AA6NE01 2351 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 UMAD1C9J7I0 102 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 H7C1Q1 480 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 SRSF10O75494 262 aaKnown RBP13.75□□□□□ -0.21
UBAP1-201ENST00000297661 H2BFMP0C1H6 154 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 ANOS1P23352 680 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 CRABP1P29762 137 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 RPS10P46783 165 aaKnown RBP13.75□□□□□ -0.21
UBAP1-201ENST00000297661 TAS2R31P59538 309 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 HNRNPKP61978 463 aaKnown RBP eCLIP13.75□□□□□ -0.21
UBAP1-201ENST00000297661 TLE3Q04726 772 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 SSX2Q16385 188 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 ZNF260Q3ZCT1 412 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 ACTBL2Q562R1 376 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 TCEAL6Q6IPX3 200 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 UNQ6494/PRO21346Q6UXR6 183 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 NUP54Q7Z3B4 507 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 WDR5BQ86VZ2 330 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 SLC38A9Q8NBW4 561 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 OR10C1Q96KK4 312 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 SOX7Q9BT81 388 aa13.75□□□□□ -0.21
UBAP1-201ENST00000297661 PHF3Q92576 2039 aaKnown RBP13.74□□□□□ -0.21
UBAP1-201ENST00000297661 TERTO14746 1132 aaKnown RBP13.74□□□□□ -0.21
UBAP1-201ENST00000297661 PMP2P02689 132 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms