RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 RBM7Q9Y580 266 aaKnown RBP8.15□□□□□ -1.1
PRDM9-201ENST00000296682 MGAQ8IWI9 3026 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 DSPP15924 2871 aaKnown RBP8.15□□□□□ -1.1
PRDM9-201ENST00000296682 SIGLEC5O15389 551 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 CDC14BO60729 498 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 CXCL2P19875 107 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 HOXA6P31267 233 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 AKR1C2P52895 323 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 SEC61A1P61619 476 aaKnown RBP8.15□□□□□ -1.1
PRDM9-201ENST00000296682 AKR1C1Q04828 323 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 PHLDA2Q53GA4 152 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 PDSS1Q5T2R2 415 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 ZBTB37Q5TC79 503 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 INO80EQ8NBZ0 244 aaPredicted RBP8.15□□□□□ -1.1
PRDM9-201ENST00000296682 LRRC20Q8TCA0 184 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 SGK3Q96BR1 496 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 SMIM3Q9BZL3 60 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 ZNF581Q9P0T4 197 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 SLC7A11Q9UPY5 501 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 FLVCR1Q9Y5Y0 555 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 AKAP6Q13023 2319 aa8.15□□□□□ -1.1
PRDM9-201ENST00000296682 A0A1B0GV50 99 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 ALX3O95076 343 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 MPC2O95563 127 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 SRD5A2P31213 254 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 TSC22D1Q15714 1073 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 DCAF10Q5QP82 559 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 SLC25A26Q70HW3 274 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 PGAP1Q75T13 922 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 PEG10Q86TG7 708 aaKnown RBP8.15□□□□□ -1.11
PRDM9-201ENST00000296682 SKA3Q8IX90 412 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 FBXL14Q8N1E6 418 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 OR56B1Q8NGI3 324 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 SLC25A28Q96A46 364 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 HIST1H2AAQ96QV6 131 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 PHB2Q99623 299 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 PROK2Q9HC23 129 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 TMEM9BQ9NQ34 198 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 SLC7A10Q9NS82 523 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 MCTS1Q9ULC4 181 aaKnown RBP8.15□□□□□ -1.11
PRDM9-201ENST00000296682 VSIG4Q9Y279 399 aa8.15□□□□□ -1.11
PRDM9-201ENST00000296682 IGKV1-9A0A0C4DH69 117 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 OR5H14A6NHG9 310 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 NXPH3O95157 252 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 TGM6O95932 706 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF250P15622 560 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 ADH6P28332 368 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 MRPL21Q7Z2W9 205 aaKnown RBP8.14□□□□□ -1.11
PRDM9-201ENST00000296682 OR51F2Q8NH61 342 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 OR1F12Q8NHA8 337 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 PPP1R1CQ8WVI7 109 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 DCUN1D4Q92564 292 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 GPHA2Q96T91 129 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 CMSS1Q9BQ75 279 aaKnown RBP8.14□□□□□ -1.11
PRDM9-201ENST00000296682 LPAR5Q9H1C0 372 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 A0A087WZY1 265 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 KANTRA0A1W2PQU2 76 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 BET1O15155 118 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 NKX2-8O15522 239 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 NRASP01111 189 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 ATP1B3P54709 279 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 PSG4Q00888 419 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 PLP2Q04941 152 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 ENDOGQ14249 297 aaKnown RBP8.14□□□□□ -1.11
PRDM9-201ENST00000296682 MICBQ29980 383 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 PIGYQ3MUY2 71 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 ABCA11PQ4W5N1 156 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 MEX3BQ6ZN04 569 aaKnown RBP8.14□□□□□ -1.11
PRDM9-201ENST00000296682 TMUB2Q71RG4 321 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 C5orf24Q7Z6I8 188 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 FADS6Q8N9I5 356 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 CDC6Q99741 560 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 PARP12Q9H0J9 701 aaKnown RBP8.14□□□□□ -1.11
PRDM9-201ENST00000296682 PPA2Q9H2U2 334 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 SHANK1Q9Y566 2161 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 PMS2P2O95744 297 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 ACKR3P25106 362 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 S100A11P31949 105 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 SERPINF1P36955 418 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 LUMP51884 338 aaPredicted RBP8.14□□□□□ -1.11
PRDM9-201ENST00000296682 TRIP6Q15654 476 aaKnown RBP8.14□□□□□ -1.11
PRDM9-201ENST00000296682 PLAC9Q5JTB6 97 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 ZIC4Q8N9L1 334 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 SPERTQ8NA61 448 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 MED30Q96HR3 178 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 IER2Q9BTL4 223 aa8.14□□□□□ -1.11
PRDM9-201ENST00000296682 A0A0B4J2A0 478 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 A0A1W2PNV4 684 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 TSPAN4O14817 238 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 RAD51DO75771 328 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 DHRS3O75911 302 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 BPNT1O95861 308 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 HIST1H1DP16402 221 aaKnown RBP8.13□□□□□ -1.11
PRDM9-201ENST00000296682 NUP62P37198 522 aaPredicted RBP8.13□□□□□ -1.11
PRDM9-201ENST00000296682 P2RY4P51582 365 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 GK2Q14410 553 aaPredicted RBP8.13□□□□□ -1.11
PRDM9-201ENST00000296682 MEF2DQ14814 521 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF260Q3ZCT1 412 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 PEAR1Q5VY43 1037 aaPredicted RBP8.13□□□□□ -1.11
PRDM9-201ENST00000296682 CLEC9AQ6UXN8 241 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms