RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 SMIM4Q8WVI0 70 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 ZNF75AQ96N20 296 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 FAM215AQ9Y5M1 114 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 SPTBN4Q9H254 2564 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 hCG_38984A0A1B0GV85 526 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 XRCC3O43542 346 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 CRHP06850 196 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 ACKR3P25106 362 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 AKR1D1P51857 326 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 RAB25P57735 213 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 TAS2R20P59543 309 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 DGCR2P98153 550 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 TUSC1Q2TAM9 212 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 CCDC36Q8IYA8 594 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 FAM57AQ8TBR7 257 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 ZNF431Q8TF32 576 aaPredicted RBP13.48□□□□□ -0.25
LSM6-201ENST00000296581 MS4A7Q9GZW8 240 aaPredicted RBP13.48□□□□□ -0.25
LSM6-201ENST00000296581 ZNF71Q9NQZ8 489 aaPredicted RBP13.48□□□□□ -0.25
LSM6-201ENST00000296581 RDH8Q9NYR8 311 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 GLS2Q9UI32 602 aa13.48□□□□□ -0.25
LSM6-201ENST00000296581 TRAV6A0A075B6T7 132 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 FIGNL2A6NMB9 653 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 LINC00587B1AMM8 73 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 BPNT1O95861 308 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 IFNA7P01567 189 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 NUP62P37198 522 aaPredicted RBP13.47□□□□□ -0.25
LSM6-201ENST00000296581 MAP2K3P46734 347 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 TDGF1P3P51864 188 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 ZNF92Q03936 586 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 RIPPLY1Q0D2K3 151 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 UBE2V2Q15819 145 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 GABRA6Q16445 453 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 C1orf185Q5T7R7 199 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 RNF144BQ7Z419 303 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 WBP1Q96G27 269 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 FBLN5Q9UBX5 448 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 UBQLN2Q9UHD9 624 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 C5orf49A4QMS7 147 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 FABP7O15540 132 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 TOXO94900 526 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 CGAP01215 116 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 FCER2P06734 321 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 RAB6AP20340 208 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 INPP1P49441 399 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 MRPS10P82664 201 aaKnown RBP13.47□□□□□ -0.25
LSM6-201ENST00000296581 QRFPP83859 136 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 FAM3AP98173 230 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 OR8B8Q15620 311 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 EIF2S3LQ2VIR3 472 aaKnown RBP13.47□□□□□ -0.25
LSM6-201ENST00000296581 CD163Q86VB7 1156 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 GLCCI1Q86VQ1 547 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 GABRG1Q8N1C3 465 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 STARD4Q96DR4 205 aa13.47□□□□□ -0.25
LSM6-201ENST00000296581 DMXL2Q8TDJ6 3036 aa13.46□□□□□ -0.25
LSM6-201ENST00000296581 GGT3PA6NGU5 568 aa13.46□□□□□ -0.25
LSM6-201ENST00000296581 GABARAPH6UMI1 98 aa13.46□□□□□ -0.25
LSM6-201ENST00000296581 HCKP08631 526 aa13.46□□□□□ -0.25
LSM6-201ENST00000296581 GSK3AP49840 483 aa13.46□□□□□ -0.25
LSM6-201ENST00000296581 CXADRP78310 365 aa13.46□□□□□ -0.25
LSM6-201ENST00000296581 TMEM42Q69YG0 159 aa13.46□□□□□ -0.25
LSM6-201ENST00000296581 CRIP3Q6Q6R5 217 aa13.46□□□□□ -0.25
LSM6-201ENST00000296581 DNM1P46Q6ZS02 220 aa13.46□□□□□ -0.25
LSM6-201ENST00000296581 MDP1Q86V88 176 aa13.46□□□□□ -0.25
LSM6-201ENST00000296581 C1orf162Q8NEQ5 155 aaPredicted RBP13.46□□□□□ -0.25
LSM6-201ENST00000296581 APOBEC3DQ96AK3 386 aaPredicted RBP13.46□□□□□ -0.25
LSM6-201ENST00000296581 COA4Q9NYJ1 87 aa13.46□□□□□ -0.25
LSM6-201ENST00000296581 MGAT4AQ9UM21 535 aa13.46□□□□□ -0.25
LSM6-201ENST00000296581 LAMA5O15230 3695 aa13.46□□□□□ -0.26
LSM6-201ENST00000296581 INTS1Q8N201 2190 aaKnown RBP13.46□□□□□ -0.26
LSM6-201ENST00000296581 TRAV20A0A0B4J274 112 aa13.46□□□□□ -0.26
LSM6-201ENST00000296581 LYRM1O43325 122 aa13.46□□□□□ -0.26
LSM6-201ENST00000296581 RAD51DO75771 328 aa13.46□□□□□ -0.26
LSM6-201ENST00000296581 SERPINA5P05154 406 aa13.46□□□□□ -0.26
LSM6-201ENST00000296581 CD3GP09693 182 aa13.46□□□□□ -0.26
LSM6-201ENST00000296581 RAB14P61106 215 aa13.46□□□□□ -0.26
LSM6-201ENST00000296581 LINC00303Q3SY05 128 aa13.46□□□□□ -0.26
LSM6-201ENST00000296581 ZNF57Q68EA5 555 aaPredicted RBP13.46□□□□□ -0.26
LSM6-201ENST00000296581 ZC3HAV1LQ96H79 300 aaKnown RBP13.46□□□□□ -0.26
LSM6-201ENST00000296581 SPACA5Q96QH8 159 aa13.46□□□□□ -0.26
LSM6-201ENST00000296581 RBFOX1Q9NWB1 397 aaKnown RBP13.46□□□□□ -0.26
LSM6-201ENST00000296581 TINAGQ9UJW2 476 aa13.46□□□□□ -0.26
LSM6-201ENST00000296581 RAB22AQ9UL26 194 aa13.46□□□□□ -0.26
LSM6-201ENST00000296581 PROCRQ9UNN8 238 aa13.46□□□□□ -0.26
LSM6-201ENST00000296581 PRRC2CQ9Y520 2896 aaKnown RBP13.45□□□□□ -0.26
LSM6-201ENST00000296581 A0A0A6YYJ9 748 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 hCG_1807616A0A1W2PRN6 198 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 LYZL6O75951 148 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 KDM4BO94953 1096 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 VSIG8P0DPA2 414 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 CCL2P13500 99 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 CCNOP22674 350 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 APLNRP35414 380 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 TIMP3P35625 211 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 MZT2BQ6NZ67 158 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 ANGPTL5Q86XS5 388 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 PAQR4Q8N4S7 273 aaPredicted RBP13.45□□□□□ -0.26
LSM6-201ENST00000296581 CISD2Q8N5K1 135 aaKnown RBP13.45□□□□□ -0.26
LSM6-201ENST00000296581 CLRN3Q8NCR9 226 aa13.45□□□□□ -0.26
LSM6-201ENST00000296581 C1orf147Q96MC9 270 aaPredicted RBP13.45□□□□□ -0.26
LSM6-201ENST00000296581 DPCDQ9BVM2 203 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms