RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 A0A1W2PPE2 198 aa9.89□□□□□ -0.83
PBRM1-201ENST00000296302 A0A1W2PR64 198 aa9.89□□□□□ -0.83
PBRM1-201ENST00000296302 A0A1W2PRV1 198 aa9.89□□□□□ -0.83
PBRM1-201ENST00000296302 M0R143 59 aa9.89□□□□□ -0.83
PBRM1-201ENST00000296302 CDC42EP2O14613 210 aa9.89□□□□□ -0.83
PBRM1-201ENST00000296302 TCTEX1D1Q8N7M0 179 aa9.89□□□□□ -0.83
PBRM1-201ENST00000296302 OR5C1Q8NGR4 320 aa9.89□□□□□ -0.83
PBRM1-201ENST00000296302 NGBQ9NPG2 151 aa9.89□□□□□ -0.83
PBRM1-201ENST00000296302 SIRT3Q9NTG7 399 aaPredicted RBP9.89□□□□□ -0.83
PBRM1-201ENST00000296302 SDHBP21912 280 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 HAAOP46952 286 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 CSN1S1P47710 185 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 TMEM33P57088 247 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 VHLLQ6RSH7 139 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 EXTL1Q92935 676 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 ZG16BQ96DA0 208 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 BCORQ6W2J9 1755 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 A0A087X0M5 115 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 A0A1B0GX30 115 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 FFAR1O14842 300 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 ARL16Q0P5N6 197 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 COTL1Q14019 142 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 KISS1Q15726 138 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 JMJD6Q6NYC1 403 aaPredicted RBP9.88□□□□□ -0.83
PBRM1-201ENST00000296302 DGAT2L6Q6ZPD8 337 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 KCNE4Q8WWG9 221 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 EDARADDQ8WWZ3 215 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 MRPS18AQ9NVS2 196 aaKnown RBP9.88□□□□□ -0.83
PBRM1-201ENST00000296302 MIOXQ9UGB7 285 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 NRAPQ86VF7 1730 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 MAP1LC3B2A6NCE7 125 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 RBFOX3A6NFN3 312 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 ABCD4O14678 606 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 EPPINO95925 133 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 IGHV3-9P01782 118 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 CCKARP32238 428 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 ERVFC1-1P60608 527 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 LYPD8Q6UX82 237 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 OVCH2Q7RTZ1 564 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 OR5AS1Q8N127 324 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 MAP1LC3BQ9GZQ8 125 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 PPP1R3EQ9H7J1 279 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 CACNA1CQ13936 2221 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 AQP7P3A6NL99 342 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 PLRG1O43660 514 aaKnown RBP9.88□□□□□ -0.83
PBRM1-201ENST00000296302 FUT7Q11130 342 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 FOXF1Q12946 379 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 ZNF345Q14585 488 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 KCNAB1Q14722 419 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 TIPARPQ7Z3E1 657 aaKnown RBP9.88□□□□□ -0.83
PBRM1-201ENST00000296302 FBXL14Q8N1E6 418 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 TAAR9Q96RI9 348 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 KIAA1551Q9HCM1 1747 aa9.88□□□□□ -0.83
PBRM1-201ENST00000296302 LRRC30A6NM36 301 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 B4DEV8 164 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 ONECUT2O95948 504 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 CRYBA1P05813 215 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 PTGFRP43088 359 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 RPL29P47914 159 aaKnown RBP9.87□□□□□ -0.83
PBRM1-201ENST00000296302 CNN1P51911 297 aaKnown RBP9.87□□□□□ -0.83
PBRM1-201ENST00000296302 CLN3Q13286 438 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 PMS2P11Q13670 270 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 TMEM178AQ8NBL3 297 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 RSRP1Q9BUV0 290 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 ZNF391Q9UJN7 358 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 SSC5DA1L4H1 1573 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 C7orf77A4D0Y5 90 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 C5orf49A4QMS7 147 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 GALR2O43603 387 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-201ENST00000296302 SPRY1O43609 319 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-201ENST00000296302 CDKN2AP42771 156 aaKnown RBP9.87□□□□□ -0.83
PBRM1-201ENST00000296302 RTL8BQ17RB0 113 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 YRDCQ86U90 279 aaKnown RBP9.87□□□□□ -0.83
PBRM1-201ENST00000296302 CCL4L1Q8NHW4 92 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 ELSPBP1Q96BH3 223 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 FER1L6-AS2Q96M78 137 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 SHROOM3Q8TF72 1996 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 MFNGO00587 321 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 RRADP55042 308 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 NCMAPQ5T1S8 102 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 BCL7CQ8WUZ0 217 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-201ENST00000296302 S1PR3Q99500 378 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 NRG2O14511 850 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-201ENST00000296302 DEFA4P12838 97 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 GZMMP51124 257 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 ERHP84090 104 aaKnown RBP9.87□□□□□ -0.83
PBRM1-201ENST00000296302 TIAL1Q01085 375 aaKnown RBP eCLIP9.87□□□□□ -0.83
PBRM1-201ENST00000296302 TUSC1Q2TAM9 212 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 LBHQ53QV2 105 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-201ENST00000296302 SLC25A42Q86VD7 318 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 TSPAN32Q96QS1 320 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 MS4A7Q9GZW8 240 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-201ENST00000296302 Q9N2K0 584 aa9.87□□□□□ -0.83
PBRM1-201ENST00000296302 LINC01553A4QN01 128 aa9.86□□□□□ -0.83
PBRM1-201ENST00000296302 PRKNO60260 465 aaPredicted RBP9.86□□□□□ -0.83
PBRM1-201ENST00000296302 CDC14BO60729 498 aa9.86□□□□□ -0.83
PBRM1-201ENST00000296302 IGF2P01344 180 aa9.86□□□□□ -0.83
PBRM1-201ENST00000296302 CTSDP07339 412 aaPredicted RBP9.86□□□□□ -0.83
PBRM1-201ENST00000296302 OR5G3P0C626 314 aa9.86□□□□□ -0.83
PBRM1-201ENST00000296302 PMCHP20382 165 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms