RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 NWD1Q149M9 1564 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 AHRRA9YTQ3 701 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 TNFSF15O95150 251 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 HSPB1P04792 205 aaKnown RBP10.55□□□□□ -0.72
SNIP1-201ENST00000296215 HIST1H1EP10412 219 aaKnown RBP10.55□□□□□ -0.72
SNIP1-201ENST00000296215 FBXW9Q5XUX1 488 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 MVB12AQ96EY5 273 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 SMIM8Q96KF7 97 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 RARRES2Q99969 163 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 IL21Q9HBE4 155 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 GKN1Q9NS71 199 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 A0A0U1RQV5 110 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 ERI3O43414 337 aaKnown RBP10.55□□□□□ -0.72
SNIP1-201ENST00000296215 MEP1BQ16820 701 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 TMEM249Q2WGJ8 235 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 COMMD6Q7Z4G1 85 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 CLEC1AQ8NC01 280 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 LINC00116Q8NCU8 138 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 LMF2Q9BU23 707 aaKnown RBP10.55□□□□□ -0.72
SNIP1-201ENST00000296215 MANBALQ9NQG1 85 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 MYO5BQ9ULV0 1848 aa10.55□□□□□ -0.72
SNIP1-201ENST00000296215 TRAV26-1A0A087WT03 109 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 PPBPP02775 128 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 ZBTB25P24278 435 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 CDC42EP1Q00587 391 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 FOXK2Q01167 660 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 MS4A13Q5J8X5 152 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 SMIM20Q8N5G0 67 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 SIRT6Q8N6T7 355 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 ARRDC3Q96B67 414 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 WDR61Q9GZS3 305 aaKnown RBP10.54□□□□□ -0.72
SNIP1-201ENST00000296215 SPCS1Q9Y6A9 102 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 PHRF1Q9P1Y6 1649 aaKnown RBP10.54□□□□□ -0.72
SNIP1-201ENST00000296215 TECPR2O15040 1411 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 TRAV27A0A087WT01 109 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 DPRXA6NFQ7 191 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 ARPC3O15145 178 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 GJB1P08034 283 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 CXCL1P09341 107 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 FAM157BP0CG42 384 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 HTR1DP28221 377 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 ACVRL1P37023 503 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 RBM11P57052 281 aaKnown RBP10.54□□□□□ -0.72
SNIP1-201ENST00000296215 RBPJQ06330 500 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 GPRIN1Q7Z2K8 1008 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 APOBEC3FQ8IUX4 373 aaKnown RBP10.54□□□□□ -0.72
SNIP1-201ENST00000296215 EMG1Q92979 244 aaKnown RBP10.54□□□□□ -0.72
SNIP1-201ENST00000296215 FAM71F1Q96KD3 344 aaPredicted RBP10.54□□□□□ -0.72
SNIP1-201ENST00000296215 SARGQ9BW04 601 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 WNT11O96014 354 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 GAPDHP04406 335 aaKnown RBP10.54□□□□□ -0.72
SNIP1-201ENST00000296215 RPS4Y1P22090 263 aaKnown RBP10.54□□□□□ -0.72
SNIP1-201ENST00000296215 THBS2P35442 1172 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 SLC2A12Q8TD20 617 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 ADAT3Q96EY9 351 aaPredicted RBP10.54□□□□□ -0.72
SNIP1-201ENST00000296215 HAPLN2Q9GZV7 340 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 FNDC4Q9H6D8 234 aaPredicted RBP10.54□□□□□ -0.72
SNIP1-201ENST00000296215 A0A087WUJ7 227 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 CD8AP01732 235 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 GLI4P10075 376 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 AADACP22760 399 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 LMO2P25791 158 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 OR1D2P34982 312 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 RPS18P62269 152 aaKnown RBP10.54□□□□□ -0.72
SNIP1-201ENST00000296215 NOGQ13253 232 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 C2orf68Q2NKX9 166 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 PWWP2BQ6NUJ5 590 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 IGSF21Q96ID5 467 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 WNT10AQ9GZT5 417 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 YAE1D1Q9NRH1 226 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 HHLA2Q9UM44 414 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 NTNG1Q9Y2I2 539 aa10.54□□□□□ -0.72
SNIP1-201ENST00000296215 PHF1O43189 567 aaPredicted RBP10.53□□□□□ -0.72
SNIP1-201ENST00000296215 RAMP3O60896 148 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 SFT2D2O95562 160 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 CA2P00918 260 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 UCP2P55851 309 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 IER5LQ5T953 404 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 SLC25A42Q86VD7 318 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 ARL14EPQ8N8R7 260 aaPredicted RBP10.53□□□□□ -0.72
SNIP1-201ENST00000296215 OR4C15Q8NGM1 316 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 MRAP2Q96G30 205 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 A0A087WUU8 490 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 CD300LBA8K4G0 201 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 ENTPD8Q5MY95 495 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 SBSNQ6UWP8 590 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 CMTM8Q8IZV2 173 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 GPR32P1Q8NGA4 272 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 OR52E5Q8NH55 327 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 FAM206AQ9NX38 181 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 RNF222A6NCQ9 220 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 C8orf89P0DMQ9 161 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 ERGP11308 486 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 ATP5IP56385 69 aaPredicted RBP10.53□□□□□ -0.72
SNIP1-201ENST00000296215 RND3P61587 244 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 HERV-K104P63124 156 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 TCTN1Q2MV58 587 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 RPEL1Q2QD12 228 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 SLC18B1Q6NT16 456 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 OR2C3Q8N628 320 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms