RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 LHFPL2Q6ZUX7 228 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 HINT3Q9NQE9 182 aaKnown RBP8.91□□□□□ -0.98
COL6A3-201ENST00000295550 OR5AL1P0C617 328 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 OPRM1P35372 400 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 OLIG3Q7RTU3 272 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 BOD1Q96IK1 185 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 COMMD5Q9GZQ3 224 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 RGS13O14921 159 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 WDR1O75083 606 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 RTN4IP1Q8WWV3 396 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-201ENST00000295550 TEAD3Q99594 435 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 C12orf49Q9H741 205 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 M0QZK8 103 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 CRXO43186 299 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-201ENST00000295550 GGCTO75223 188 aaKnown RBP8.91□□□□□ -0.98
COL6A3-201ENST00000295550 WISP3O95389 354 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-201ENST00000295550 GALNT16Q8N428 558 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 HSPB2A8KAH6 182 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 KCNJ3P48549 501 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 HSPB2Q16082 182 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 TUSC1Q2TAM9 212 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 EMC4Q5J8M3 183 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 MARCH1Q8TCQ1 289 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 MMACHCQ9Y4U1 282 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 OR2W3Q7Z3T1 314 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 NKAIN4Q8IVV8 208 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 EXD3Q8N9H8 876 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 DUSP23Q9BVJ7 150 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 LY86O95711 162 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 GYPAP02724 150 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 ZNF25P17030 456 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-201ENST00000295550 PI3P19957 117 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 TMEM267Q0VDI3 215 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-201ENST00000295550 CD300LDQ6UXZ3 194 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 MYPOPQ86VE0 399 aaPredicted RBP8.91□□□□□ -0.98
COL6A3-201ENST00000295550 TAAR6Q96RI8 345 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 MENTQ9BUN1 341 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 DUSP13Q9UII6 198 aa8.91□□□□□ -0.98
COL6A3-201ENST00000295550 HELTA6NFD8 242 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 OR2T6Q8NHC8 308 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 SCMH1Q96GD3 660 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 DAPP1Q9UN19 280 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 PTPRDP23468 1912 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 TSC2P49815 1807 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 ELOA3CA0A087WX78 387 aaPredicted RBP8.9□□□□□ -0.98
COL6A3-201ENST00000295550 NRASP01111 189 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 AREGP15514 252 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 MRPS21P82921 87 aaKnown RBP8.9□□□□□ -0.98
COL6A3-201ENST00000295550 IFITM5A6NNB3 132 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 TNFRSF10CO14798 259 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 SIGLEC6O43699 453 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 SEMG1P04279 462 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 CD22P20273 847 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 OR5AS1Q8N127 324 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 VN1R2Q8NFZ6 395 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 NUDCD2Q8WVJ2 157 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 HGDQ93099 445 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 PRR14Q9BWN1 585 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 CD3DP04234 171 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 CA5BP1Q8WTZ4 195 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 CACFD1Q9UGQ2 172 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 A0A1B0GTQ1 180 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 HCRTR1O43613 425 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 CYC1P08574 325 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 ABCD3P28288 659 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 VEGFBP49765 207 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 PMP22Q01453 160 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 PACRGQ96M98 296 aaPredicted RBP8.9□□□□□ -0.98
COL6A3-201ENST00000295550 POMT2Q9UKY4 750 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 TRAV1-2A0A0B4J238 106 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 HRO43593 1189 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 FGF9P31371 208 aaPredicted RBP8.9□□□□□ -0.98
COL6A3-201ENST00000295550 CRYBB2P43320 205 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 RBP2P50120 134 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 DHRS13Q6UX07 377 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 IL22RA2Q969J5 263 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 SNX22Q96L94 193 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 RSRP1Q9BUV0 290 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 WASHC3Q9Y3C0 194 aa8.9□□□□□ -0.98
COL6A3-201ENST00000295550 GPNMBQ14956 572 aa8.9□□□□□ -0.99
COL6A3-201ENST00000295550 FBXO46Q6PJ61 603 aaPredicted RBP8.9□□□□□ -0.99
COL6A3-201ENST00000295550 OR51E1Q8TCB6 317 aa8.9□□□□□ -0.99
COL6A3-201ENST00000295550 SMIM4Q8WVI0 70 aa8.9□□□□□ -0.99
COL6A3-201ENST00000295550 CSF3RQ99062 836 aa8.9□□□□□ -0.99
COL6A3-201ENST00000295550 DHODHQ02127 395 aa8.9□□□□□ -0.99
COL6A3-201ENST00000295550 KIAA0040Q15053 153 aa8.9□□□□□ -0.99
COL6A3-201ENST00000295550 CLLU1Q5K131 121 aa8.9□□□□□ -0.99
COL6A3-201ENST00000295550 PRSS42Q7Z5A4 293 aa8.9□□□□□ -0.99
COL6A3-201ENST00000295550 DCBLD2Q96PD2 775 aa8.9□□□□□ -0.99
COL6A3-201ENST00000295550 HTR1DP28221 377 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 ADPRHP54922 357 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 PKIAP61925 76 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 LAIR1Q6GTX8 287 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 LRP11Q86VZ4 500 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 SPACA5Q96QH8 159 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 CHST6Q9GZX3 395 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 AP4M1O00189 453 aa8.89□□□□□ -0.99
COL6A3-201ENST00000295550 HIST1H1CP16403 213 aaKnown RBP8.89□□□□□ -0.99
COL6A3-201ENST00000295550 CDC34P49427 236 aaPredicted RBP8.89□□□□□ -0.99
COL6A3-201ENST00000295550 SPCS3P61009 180 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms