RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 COL6A6A6NMZ7 2263 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 MEIS3P1A6NDR6 274 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 RPL36A-HNRNPH2H7BZ11 118 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 FARS2O95363 451 aaKnown RBP14.68□□□□□ -0.06
CPSF4-201ENST00000292476 AMY2AP04746 511 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 CST2P09228 141 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 OR4E1P0C645 316 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 RAB3AP20336 220 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 HLXQ14774 488 aaPredicted RBP14.68□□□□□ -0.06
CPSF4-201ENST00000292476 TMUB2Q71RG4 321 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 P4HA3Q7Z4N8 544 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 C12orf45Q8N5I9 185 aaPredicted RBP14.68□□□□□ -0.06
CPSF4-201ENST00000292476 ZDHHC22Q8N966 263 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 OR10S1Q8NGN2 331 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 OR8S1Q8NH09 359 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 DVL3Q92997 716 aaPredicted RBP14.68□□□□□ -0.06
CPSF4-201ENST00000292476 NABP1Q96AH0 204 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 FGGYQ96C11 551 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 ZNF416Q9BWM5 594 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 CNTD2Q9H8S5 307 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 GPR35Q9HC97 309 aa14.68□□□□□ -0.06
CPSF4-201ENST00000292476 TLN1Q9Y490 2541 aaKnown RBP14.68□□□□□ -0.06
CPSF4-201ENST00000292476 AHRRA9YTQ3 701 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 ZNF587BE7ETH6 402 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 RAB27BO00194 218 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 CD8AP01732 235 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 AGTR1P30556 359 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 FGL1Q08830 312 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 SCRN3Q0VDG4 424 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 FAHD2BQ6P2I3 314 aaPredicted RBP14.67□□□□□ -0.06
CPSF4-201ENST00000292476 ZNF100Q8IYN0 542 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 BPIFB2Q8N4F0 458 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 SCARB1Q8WTV0 552 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 FAHD2AQ96GK7 314 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 GMPPAQ96IJ6 420 aaPredicted RBP14.67□□□□□ -0.06
CPSF4-201ENST00000292476 FOXB1Q99853 325 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 CALHM2Q9HA72 323 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 TMEM38BQ9NVV0 291 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 KCNN3Q9UGI6 736 aa14.67□□□□□ -0.06
CPSF4-201ENST00000292476 RFPL4AA6NLU0 287 aa14.66□□□□□ -0.06
CPSF4-201ENST00000292476 RFPL4AL1F8VTS6 287 aa14.66□□□□□ -0.06
CPSF4-201ENST00000292476 CCL1P22362 96 aa14.66□□□□□ -0.06
CPSF4-201ENST00000292476 CTSSP25774 331 aa14.66□□□□□ -0.06
CPSF4-201ENST00000292476 NTF4P34130 210 aa14.66□□□□□ -0.06
CPSF4-201ENST00000292476 ECH1Q13011 328 aa14.66□□□□□ -0.06
CPSF4-201ENST00000292476 AANATQ16613 207 aa14.66□□□□□ -0.06
CPSF4-201ENST00000292476 C2orf68Q2NKX9 166 aa14.66□□□□□ -0.06
CPSF4-201ENST00000292476 CEACAM16Q2WEN9 425 aa14.66□□□□□ -0.06
CPSF4-201ENST00000292476 ATPAF1Q5TC12 328 aaPredicted RBP14.66□□□□□ -0.06
CPSF4-201ENST00000292476 C11orf88Q6PI97 169 aa14.66□□□□□ -0.06
CPSF4-201ENST00000292476 CFAP77Q6ZQR2 320 aa14.66□□□□□ -0.06
CPSF4-201ENST00000292476 PGAP1Q75T13 922 aa14.66□□□□□ -0.06
CPSF4-201ENST00000292476 RBMXL3Q8N7X1 1067 aaKnown RBP14.66□□□□□ -0.06
CPSF4-201ENST00000292476 OR1J2Q8NGS2 313 aa14.66□□□□□ -0.06
CPSF4-201ENST00000292476 TINAGL1Q9GZM7 467 aaPredicted RBP14.66□□□□□ -0.06
CPSF4-201ENST00000292476 A0A1B0GTI1 187 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 TMEM14DPA8MWL7 114 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 LMX1BO60663 402 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 CHRM2P08172 466 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 ZNF20P17024 532 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 HLA-GP17693 338 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 GNALP38405 381 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 HIST1H3AP68431 136 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 ENDOGQ14249 297 aaKnown RBP14.65□□□□□ -0.06
CPSF4-201ENST00000292476 MOGAT2Q3SYC2 334 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 KRTCAP3Q53RY4 240 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 RNASE10Q5GAN6 216 aaKnown RBP14.65□□□□□ -0.06
CPSF4-201ENST00000292476 HIST2H3PS2Q5TEC6 136 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 SIGIRRQ6IA17 410 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 OR2A2Q6IF42 318 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 TMEM65Q6PI78 240 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 HIST2H3AQ71DI3 136 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 PAQR4Q8N4S7 273 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-201ENST00000292476 ADAT3Q96EY9 351 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-201ENST00000292476 ALKBH3Q96Q83 286 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-201ENST00000292476 DHRS9Q9BPW9 319 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 PLEKHA6Q9Y2H5 1048 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 TMEM235A6NFC5 223 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 I3L521 148 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 M0QYG6 137 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 RER1O15258 196 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 BAMBIQ13145 260 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 UNC119Q13432 240 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 C3AR1Q16581 482 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 TSPO2Q5TGU0 170 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 FJX1Q86VR8 437 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 LRRC18Q8N456 261 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 ACBD4Q8NC06 268 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 OR52N4Q8NGI2 321 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 OR5M8Q8NGP6 311 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 SUN5Q8TC36 379 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 LRRC20Q8TCA0 184 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 SPTSSAQ969W0 71 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 TAAR6Q96RI8 345 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 CHST6Q9GZX3 395 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 TIMM10BQ9Y5J6 103 aa14.65□□□□□ -0.06
CPSF4-201ENST00000292476 SPTA1P02549 2419 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 FXYD6-FXYD2A0A087WZ82 144 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 hCG_1807616A0A1W2PRN6 198 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 ARPC5O15511 151 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms