RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 DHRS2Q13268 280 aa16.78■□□□□ 0.28
BRAF-201ENST00000288602 GRK1Q15835 563 aa16.78■□□□□ 0.28
BRAF-201ENST00000288602 MICBQ29980 383 aa16.78■□□□□ 0.28
BRAF-201ENST00000288602 Q6ZSR3 168 aa16.78■□□□□ 0.28
BRAF-201ENST00000288602 MDS2Q8NDY4 140 aa16.78■□□□□ 0.28
BRAF-201ENST00000288602 CCDC107Q8WV48 283 aa16.78■□□□□ 0.28
BRAF-201ENST00000288602 PRRT1Q99946 306 aa16.78■□□□□ 0.28
BRAF-201ENST00000288602 ST6GALNAC5Q9BVH7 336 aa16.78■□□□□ 0.28
BRAF-201ENST00000288602 ALX4Q9H161 411 aaPredicted RBP16.78■□□□□ 0.28
BRAF-201ENST00000288602 PLEKHA6Q9Y2H5 1048 aa16.78■□□□□ 0.28
BRAF-201ENST00000288602 ZNF587BE7ETH6 402 aa16.77■□□□□ 0.28
BRAF-201ENST00000288602 MFNGO00587 321 aa16.77■□□□□ 0.28
BRAF-201ENST00000288602 NOS1APO75052 506 aaPredicted RBP16.77■□□□□ 0.28
BRAF-201ENST00000288602 UBBP0CG47 229 aa16.77■□□□□ 0.28
BRAF-201ENST00000288602 TMEM225BP0DP42 221 aa16.77■□□□□ 0.28
BRAF-201ENST00000288602 CXCL2P19875 107 aa16.77■□□□□ 0.28
BRAF-201ENST00000288602 RIPPLY1Q0D2K3 151 aa16.77■□□□□ 0.28
BRAF-201ENST00000288602 LIN54Q6MZP7 749 aa16.77■□□□□ 0.28
BRAF-201ENST00000288602 ZNF767PQ75MW2 155 aa16.77■□□□□ 0.28
BRAF-201ENST00000288602 FBXW5Q969U6 566 aa16.77■□□□□ 0.28
BRAF-201ENST00000288602 TMEM45BQ96B21 275 aa16.77■□□□□ 0.28
BRAF-201ENST00000288602 ELMOD3Q96FG2 381 aa16.77■□□□□ 0.28
BRAF-201ENST00000288602 NUDT16L1Q9BRJ7 211 aaKnown RBP16.77■□□□□ 0.28
BRAF-201ENST00000288602 FN3KRPQ9HA64 309 aa16.77■□□□□ 0.28
BRAF-201ENST00000288602 IGKV3D-15A0A087WSY6 115 aa16.77■□□□□ 0.27
BRAF-201ENST00000288602 HLA-AP01891 365 aaKnown RBP16.77■□□□□ 0.27
BRAF-201ENST00000288602 HLA-HP01893 362 aa16.77■□□□□ 0.27
BRAF-201ENST00000288602 IFNA6P05013 189 aa16.77■□□□□ 0.27
BRAF-201ENST00000288602 GSTP1P09211 210 aaKnown RBP16.77■□□□□ 0.27
BRAF-201ENST00000288602 GABRR1P24046 479 aa16.77■□□□□ 0.27
BRAF-201ENST00000288602 C12orf45Q8N5I9 185 aaPredicted RBP16.77■□□□□ 0.27
BRAF-201ENST00000288602 ADAD2Q8NCV1 583 aaKnown RBP16.77■□□□□ 0.27
BRAF-201ENST00000288602 ZNF680Q8NEM1 530 aa16.77■□□□□ 0.27
BRAF-201ENST00000288602 ZNF581Q9P0T4 197 aa16.77■□□□□ 0.27
BRAF-201ENST00000288602 PLSCR5A0PG75 271 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 ZNF503-AS2A6NEH8 195 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 F5H5P2 479 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 FARS2O95363 451 aaKnown RBP16.76■□□□□ 0.27
BRAF-201ENST00000288602 FTH1P19P0C7X4 201 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 KRTAP27-1Q3LI81 207 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 RNFT1Q5M7Z0 435 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 RFPL4BQ6ZWI9 263 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 PIP4P1Q86T03 277 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 B3GNT2Q9NY97 397 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 MCTS1Q9ULC4 181 aaKnown RBP16.76■□□□□ 0.27
BRAF-201ENST00000288602 KLRC4-KLRK1H3BQV0 150 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 NKX2-8O15522 239 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 CFDP00746 253 aaPredicted RBP16.76■□□□□ 0.27
BRAF-201ENST00000288602 EDN3P14138 238 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 PCBD1P61457 104 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 ARG2P78540 354 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 OR8H3Q8N146 312 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 FAM89BQ8N5H3 189 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 RADILQ96JH8 1075 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 IP6K3Q96PC2 410 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 CITED4Q96RK1 184 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 SLC2A8Q9NY64 477 aa16.76■□□□□ 0.27
BRAF-201ENST00000288602 KLF13Q9Y2Y9 288 aaPredicted RBP16.76■□□□□ 0.27
BRAF-201ENST00000288602 BOD1L1Q8NFC6 3051 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 H3BUI4 141 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 CCSO14618 274 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 AKR1C4P17516 323 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 ALDH3B1P43353 468 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 P2RX3P56373 397 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 FAM3AP98173 230 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 PPP1R1AQ13522 171 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 C6orf201Q7Z4U5 140 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 STEAP2Q8NFT2 490 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 MARCH1Q8TCQ1 289 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 MICU1Q9BPX6 476 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 LDAHQ9H6V9 325 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 ARPC5O15511 151 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 NFYAP23511 347 aaPredicted RBP16.75■□□□□ 0.27
BRAF-201ENST00000288602 PMP22Q01453 160 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 NKAPLQ5M9Q1 402 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 LY6G6FQ5SQ64 297 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 NUFIP2Q7Z417 695 aaKnown RBP16.75■□□□□ 0.27
BRAF-201ENST00000288602 C10orf35Q96D05 121 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 PECRQ9BY49 303 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 NOP16Q9Y3C1 178 aaKnown RBP16.75■□□□□ 0.27
BRAF-201ENST00000288602 ZNF318Q5VUA4 2279 aa16.75■□□□□ 0.27
BRAF-201ENST00000288602 FXYD6-FXYD2A0A087WZ82 144 aa16.74■□□□□ 0.27
BRAF-201ENST00000288602 FOXI3A8MTJ6 420 aaPredicted RBP16.74■□□□□ 0.27
BRAF-201ENST00000288602 SDCBPO00560 298 aaPredicted RBP16.74■□□□□ 0.27
BRAF-201ENST00000288602 HTR3BO95264 441 aa16.74■□□□□ 0.27
BRAF-201ENST00000288602 CRYZL1O95825 349 aa16.74■□□□□ 0.27
BRAF-201ENST00000288602 SLC10A1Q14973 349 aa16.74■□□□□ 0.27
BRAF-201ENST00000288602 BATF2Q8N1L9 274 aa16.74■□□□□ 0.27
BRAF-201ENST00000288602 FXYD6Q9H0Q3 95 aa16.74■□□□□ 0.27
BRAF-201ENST00000288602 C12orf49Q9H741 205 aa16.74■□□□□ 0.27
BRAF-201ENST00000288602 NRASP01111 189 aa16.74■□□□□ 0.27
BRAF-201ENST00000288602 CD46P15529 392 aa16.74■□□□□ 0.27
BRAF-201ENST00000288602 SUN5Q8TC36 379 aa16.74■□□□□ 0.27
BRAF-201ENST00000288602 PIGCQ92535 297 aa16.74■□□□□ 0.27
BRAF-201ENST00000288602 HDHD3Q9BSH5 251 aaPredicted RBP16.74■□□□□ 0.27
BRAF-201ENST00000288602 GHRLQ9UBU3 117 aa16.74■□□□□ 0.27
BRAF-201ENST00000288602 hCG_38984A0A1B0GV85 526 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 SORDQ00796 357 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 EXOSC2Q13868 293 aaKnown RBP16.73■□□□□ 0.27
BRAF-201ENST00000288602 ZNF766Q5HY98 468 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms