RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 IL17RELQ6ZVW7 336 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 BATF2Q8N1L9 274 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 ZFP41Q8N8Y5 198 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 PLPP7Q8NBV4 271 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 SCCPDHQ8NBX0 429 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 OR8B3Q8NGG8 313 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 Q8TCH9 128 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 HPSE2Q8WWQ2 592 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 GATAD2BQ8WXI9 593 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 MYDGFQ969H8 173 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 FGGYQ96C11 551 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 BORCS8Q96FH0 119 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 FAHD2AQ96GK7 314 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 TECTBQ96PL2 329 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 OR8B2Q96RD0 313 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 CCDC90BQ9GZT6 254 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 SHARPINQ9H0F6 387 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 Q9H521 79 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 NEK6Q9HC98 313 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 SNTG1Q9NSN8 517 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 MRPS18AQ9NVS2 196 aaKnown RBP5.49□□□□□ -1.53
CD44-204ENST00000279452 HIF1ANQ9NWT6 349 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 CNOT2Q9NZN8 540 aaKnown RBP5.49□□□□□ -1.53
CD44-204ENST00000279452 ERVK-18Q9QC07 812 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 OR5V1Q9UGF6 321 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 CLEC2DQ9UHP7 191 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 HHLA2Q9UM44 414 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 DHDHQ9UQ10 334 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 ERGIC3Q9Y282 383 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 CAB39Q9Y376 341 aaPredicted RBP5.49□□□□□ -1.53
CD44-204ENST00000279452 V9GYS6 101 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 AKAP6Q13023 2319 aa5.49□□□□□ -1.53
CD44-204ENST00000279452 USF3Q68DE3 2245 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 TRAV38-1A0A0B4J264 116 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 A0A0G2JMP0 313 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 A0A0X1KG70 313 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 A0A1B0GWJ7 208 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 OOEPA6NGQ2 149 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 NKX6-3A6NJ46 265 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 TMEM212A6NML5 194 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 DHRS7CA6NNS2 312 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 LGALS8O00214 317 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 TMPRSS2O15393 492 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 PHF1O43189 567 aaPredicted RBP5.48□□□□□ -1.53
CD44-204ENST00000279452 AKR7A2O43488 359 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 ADAM20O43506 726 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 PLPP2O43688 288 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 FOXH1O75593 365 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 RHBDL1O75783 438 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 IGLV3-1P01715 115 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 HCKP08631 526 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 RPSAP08865 295 aaKnown RBP5.48□□□□□ -1.53
CD44-204ENST00000279452 PIPP12273 146 aaPredicted RBP5.48□□□□□ -1.53
CD44-204ENST00000279452 EGR1P18146 543 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 PCMT1P22061 227 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 CCL1P22362 96 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 MYF6P23409 242 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 GLRA1P23415 457 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 SRP14P37108 136 aaKnown RBP5.48□□□□□ -1.53
CD44-204ENST00000279452 PITPNBP48739 271 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 POU3F4P49335 361 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 CCR9P51686 369 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 SEC61A1P61619 476 aaKnown RBP5.48□□□□□ -1.53
CD44-204ENST00000279452 LMO4P61968 165 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 MICBQ29980 383 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 CR1LQ2VPA4 569 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 CHRFAM7AQ494W8 412 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 ZNF404Q494X3 552 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 C6orf141Q5SZD1 244 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 DCAF12L2Q5VW00 463 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 XAF1Q6GPH4 301 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 DCDC5Q6ZRR9 648 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 LRRC28Q86X40 367 aaPredicted RBP5.48□□□□□ -1.53
CD44-204ENST00000279452 ZNF573Q86YE8 665 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 GCSAMQ8N6F7 178 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 CCDC54Q8NEL0 328 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 OR4M2Q8NGB6 313 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 OR5A2Q8NGI9 324 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 OR51A4Q8NGJ6 313 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 OR13C9Q8NGT0 318 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 OR10AC1Q8NH08 325 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 HAVCR2Q8TDQ0 301 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 TMEM186Q96B77 213 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 TMIGD2Q96BF3 282 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 NEIL1Q96FI4 390 aaPredicted RBP5.48□□□□□ -1.53
CD44-204ENST00000279452 PDCD1LG2Q9BQ51 273 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 TMEM246Q9BRR3 403 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 MND1Q9BWT6 205 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 SSBP3Q9BWW4 388 aaPredicted RBP5.48□□□□□ -1.53
CD44-204ENST00000279452 JAM3Q9BX67 310 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 BEX2Q9BXY8 128 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 ANKRD60Q9BZ19 345 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 CHST5Q9GZS9 411 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 FGF23Q9GZV9 251 aaPredicted RBP5.48□□□□□ -1.53
CD44-204ENST00000279452 PATZ1Q9HBE1 687 aaKnown RBP5.48□□□□□ -1.53
CD44-204ENST00000279452 TMEM165Q9HC07 324 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 CLN8Q9UBY8 286 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 MIOXQ9UGB7 285 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 PSORS1C1Q9UIG5 152 aa5.48□□□□□ -1.53
CD44-204ENST00000279452 POLDIP2Q9Y2S7 368 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms