RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 RFPL4BQ6ZWI9 263 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 OR2W3Q7Z3T1 314 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 PIGTQ969N2 578 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 MED30Q96HR3 178 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 FYTTD1Q96QD9 318 aaKnown RBP12.53□□□□□ -0.4
TRIM23-202ENST00000274327 ATG5Q9H1Y0 275 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 KCNN3Q9UGI6 736 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 TINAGQ9UJW2 476 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 AMDHD2Q9Y303 409 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 ALG5Q9Y673 324 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 PIEZO2Q9H5I5 2752 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 A0A0A6YYH2 397 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 A0A0G2JNJ9 132 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 MED19A0JLT2 244 aaPredicted RBP12.53□□□□□ -0.4
TRIM23-202ENST00000274327 TMEM8BA6NDV4 472 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 A6NJ64 397 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 OR5H1A6NKK0 313 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 GABARAPH6UMI1 98 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 MSTNO14793 375 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 ZNF780AO75290 641 aaPredicted RBP12.53□□□□□ -0.4
TRIM23-202ENST00000274327 KDM4BO94953 1096 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 IGLV1-44P01699 117 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 UBBP0CG47 229 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 NAT2P11245 290 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 MRPS10P82664 201 aaKnown RBP12.53□□□□□ -0.4
TRIM23-202ENST00000274327 PMPCAQ10713 525 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 MRPL21Q7Z2W9 205 aaKnown RBP12.53□□□□□ -0.4
TRIM23-202ENST00000274327 FAM169BQ8N8A8 192 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 OR56B2PQ8NGI1 322 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 OR5L1Q8NGL2 311 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 NPRL2Q8WTW4 380 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 TECTBQ96PL2 329 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 GPER1Q99527 375 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 PIGMQ9H3S5 423 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 CDH20Q9HBT6 801 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 COPZ2Q9P299 210 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 Q9UFV3 132 aa12.53□□□□□ -0.4
TRIM23-202ENST00000274327 LINC00854A0A1B0GVQ3 168 aa12.52□□□□□ -0.41
TRIM23-202ENST00000274327 SMPD2O60906 423 aa12.52□□□□□ -0.41
TRIM23-202ENST00000274327 AGFG2O95081 481 aa12.52□□□□□ -0.41
TRIM23-202ENST00000274327 CD3GP09693 182 aa12.52□□□□□ -0.41
TRIM23-202ENST00000274327 PSMB1P20618 241 aaKnown RBP12.52□□□□□ -0.41
TRIM23-202ENST00000274327 PTGFRP43088 359 aa12.52□□□□□ -0.41
TRIM23-202ENST00000274327 RAG2P55895 527 aa12.52□□□□□ -0.41
TRIM23-202ENST00000274327 ZP1P60852 638 aa12.52□□□□□ -0.41
TRIM23-202ENST00000274327 CD83Q01151 205 aa12.52□□□□□ -0.41
TRIM23-202ENST00000274327 MRPL49Q13405 166 aaKnown RBP12.52□□□□□ -0.41
TRIM23-202ENST00000274327 HLXQ14774 488 aaPredicted RBP12.52□□□□□ -0.41
TRIM23-202ENST00000274327 PNLDC1Q8NA58 520 aaKnown RBP12.52□□□□□ -0.41
TRIM23-202ENST00000274327 KDF1Q8NAX2 398 aaPredicted RBP12.52□□□□□ -0.41
TRIM23-202ENST00000274327 WBP1Q96G27 269 aa12.52□□□□□ -0.41
TRIM23-202ENST00000274327 AUNIPQ9H7T9 357 aa12.52□□□□□ -0.41
TRIM23-202ENST00000274327 MYEF2Q9P2K5 600 aaKnown RBP12.52□□□□□ -0.41
TRIM23-202ENST00000274327 GHRLQ9UBU3 117 aa12.52□□□□□ -0.41
TRIM23-202ENST00000274327 SLC25A15Q9Y619 301 aa12.52□□□□□ -0.41
TRIM23-202ENST00000274327 A8MXE2 369 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 SNAPC5O75971 98 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 CST4P01036 141 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 SLC6A1P30531 599 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 RNASE12Q5GAN4 147 aaKnown RBP12.51□□□□□ -0.41
TRIM23-202ENST00000274327 ZNF57Q68EA5 555 aaPredicted RBP12.51□□□□□ -0.41
TRIM23-202ENST00000274327 LHFPL2Q6ZUX7 228 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 MOB3CQ70IA8 216 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 CSNK2A3Q8NEV1 391 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 OR52I2Q8NH67 350 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 PIGCQ92535 297 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 GCDHQ92947 438 aaPredicted RBP12.51□□□□□ -0.41
TRIM23-202ENST00000274327 C7orf50Q9BRJ6 194 aaKnown RBP12.51□□□□□ -0.41
TRIM23-202ENST00000274327 CRIM1Q9NZV1 1036 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 ZNF629Q9UEG4 869 aaPredicted RBP12.51□□□□□ -0.41
TRIM23-202ENST00000274327 TLN1Q9Y490 2541 aaKnown RBP12.51□□□□□ -0.41
TRIM23-202ENST00000274327 IGKV1-27A0A075B6S5 117 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 TRAV18A0A075B6X5 111 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 A8MV72 311 aaPredicted RBP12.51□□□□□ -0.41
TRIM23-202ENST00000274327 INMT-MINDY4F8WBC2 141 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 PTHLHP12272 177 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 ZNF35P13682 527 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 IL32P24001 234 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 FUT6P51993 359 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 TIMM23BQ5SRD1 257 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 C1QL2Q7Z5L3 287 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 MRGPRGQ86SM5 289 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 TNFAIP8L1Q8WVP5 186 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 FAM46BQ96A09 425 aa12.51□□□□□ -0.41
TRIM23-202ENST00000274327 CPNE2Q96FN4 548 aaPredicted RBP12.51□□□□□ -0.41
TRIM23-202ENST00000274327 EIF3KQ9UBQ5 218 aaKnown RBP12.51□□□□□ -0.41
TRIM23-202ENST00000274327 SHANK1Q9Y566 2161 aa12.5□□□□□ -0.41
TRIM23-202ENST00000274327 C7orf66A4D0T2 115 aa12.5□□□□□ -0.41
TRIM23-202ENST00000274327 METTL21EPA6NDL7 271 aa12.5□□□□□ -0.41
TRIM23-202ENST00000274327 CD300LBA8K4G0 201 aa12.5□□□□□ -0.41
TRIM23-202ENST00000274327 ZNF850A8MQ14 1090 aa12.5□□□□□ -0.41
TRIM23-202ENST00000274327 RAB27BO00194 218 aa12.5□□□□□ -0.41
TRIM23-202ENST00000274327 CDC14BO60729 498 aa12.5□□□□□ -0.41
TRIM23-202ENST00000274327 DHFRP00374 187 aa12.5□□□□□ -0.41
TRIM23-202ENST00000274327 CECR9P0C854 216 aa12.5□□□□□ -0.41
TRIM23-202ENST00000274327 GDNFP39905 211 aa12.5□□□□□ -0.41
TRIM23-202ENST00000274327 RBP2P50120 134 aa12.5□□□□□ -0.41
TRIM23-202ENST00000274327 MTCP1P56278 107 aa12.5□□□□□ -0.41
TRIM23-202ENST00000274327 MOGAT2Q3SYC2 334 aa12.5□□□□□ -0.41
TRIM23-202ENST00000274327 PLCXD3Q63HM9 321 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms