RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 RPS11P62280 158 aaKnown RBP eCLIP12.91□□□□□ -0.34
CNOT9-201ENST00000273064 CFHR1Q03591 330 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 ZNF626Q68DY1 528 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 CATSPERDQ86XM0 798 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 OR9K2Q8NGE7 335 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 ADAM19Q9H013 955 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 DNAJB11Q9UBS4 358 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 RNF150Q9ULK6 438 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 DENND4CQ5VZ89 1909 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 A0A1B0GTQ1 180 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 FTCDNL1E5RQL4 147 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 IGKV3-11P04433 115 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 RPS27AP62979 156 aaKnown RBP12.91□□□□□ -0.34
CNOT9-201ENST00000273064 UBA52P62987 128 aaKnown RBP12.91□□□□□ -0.34
CNOT9-201ENST00000273064 CLN3Q13286 438 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 CAMK2BQ13554 666 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 AADACL3Q5VUY0 350 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 LILRB2Q8N423 598 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 D6RAR5 112 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 NPIPB9F8W1W9 429 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 NXPH2O95156 264 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 WISP1O95388 367 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 MST1P26927 711 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 ARF1P84077 181 aaKnown RBP12.91□□□□□ -0.34
CNOT9-201ENST00000273064 SHEQ5VZ18 495 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 FAM122BQ7Z309 247 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 ZSCAN4Q8NAM6 433 aaPredicted RBP12.91□□□□□ -0.34
CNOT9-201ENST00000273064 FBXW5Q969U6 566 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 FAM86C1Q9NVL1 165 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 EMC3Q9P0I2 261 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 FZR1Q9UM11 496 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 TIMM10BQ9Y5J6 103 aa12.91□□□□□ -0.34
CNOT9-201ENST00000273064 TUSC2O75896 110 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 IGHV3-13P01766 116 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 IGHV3-7P01780 117 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 IL2RGP31785 369 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 H3F3CQ6NXT2 135 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 RTN4IP1Q8WWV3 396 aaPredicted RBP12.9□□□□□ -0.34
CNOT9-201ENST00000273064 ZC3HAV1LQ96H79 300 aaKnown RBP12.9□□□□□ -0.34
CNOT9-201ENST00000273064 ZNF768Q9H5H4 540 aaKnown RBP12.9□□□□□ -0.34
CNOT9-201ENST00000273064 C1orf123Q9NWV4 160 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 OPN4Q9UHM6 478 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 USF3Q68DE3 2245 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 CCDC187A0A096LP49 1063 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 A0A0J9YW62 118 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 SIRPB1O00241 398 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 DXOO77932 396 aaKnown RBP12.9□□□□□ -0.34
CNOT9-201ENST00000273064 IFNA5P01569 189 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 DSCR4P56555 118 aaPredicted RBP12.9□□□□□ -0.34
CNOT9-201ENST00000273064 ALKBH6Q3KRA9 238 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 PABPC1L2AQ5JQF8 200 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 ACOT7LQ6ZUV0 252 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 CCDC71LQ8N9Z2 235 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 LRP3O75074 770 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 HIST1H1DP16402 221 aaKnown RBP12.9□□□□□ -0.34
CNOT9-201ENST00000273064 PPIAP62937 165 aaKnown RBP12.9□□□□□ -0.34
CNOT9-201ENST00000273064 TGFBR3Q03167 851 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 C1QTNF12Q5T7M4 302 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 WDR74Q6RFH5 385 aaPredicted RBP12.9□□□□□ -0.34
CNOT9-201ENST00000273064 NELFAQ9H3P2 528 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 KCNK7Q9Y2U2 307 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 FBXO7Q9Y3I1 522 aa12.9□□□□□ -0.34
CNOT9-201ENST00000273064 IGLV1-36A0A0B4J1U3 117 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 BPNT1O95861 308 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 IFNA2P01563 188 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 HOXD11P31277 338 aaPredicted RBP12.89□□□□□ -0.35
CNOT9-201ENST00000273064 ZNF808Q8N4W9 903 aaPredicted RBP12.89□□□□□ -0.35
CNOT9-201ENST00000273064 DEFB108BQ8NET1 73 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 C2CD4CQ8TF44 421 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 SULT4A1Q9BR01 284 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 KCNJ16Q9NPI9 418 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 HEATR1Q9H583 2144 aaKnown RBP12.89□□□□□ -0.35
CNOT9-201ENST00000273064 A0A1W2PPC1 479 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 CST7O76096 145 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 LYPD3O95274 346 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 RAB1AP62820 205 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 EFNB1P98172 346 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 RAB32Q13637 225 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 AKR1C8PQ5T2L2 129 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 TMEM229BQ8NBD8 167 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 APCDD1LQ8NCL9 501 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 OR56B2PQ8NGI1 322 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 NUBPLQ8TB37 319 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 BCO1Q9HAY6 547 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 KCNIP1Q9NZI2 227 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 OR13C7P0DN81 318 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 CXCL2P19875 107 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 ZXDAP98168 799 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 TGIF1Q15583 401 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 OR2T2Q6IF00 324 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 ZNF574Q6ZN55 896 aaPredicted RBP12.89□□□□□ -0.35
CNOT9-201ENST00000273064 C1orf210Q8IVY1 113 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 OR2M3Q8NG83 312 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 OR2V1Q8NHB1 315 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 EMG1Q92979 244 aaKnown RBP12.89□□□□□ -0.35
CNOT9-201ENST00000273064 WNT2BQ93097 391 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 FAM96BQ9Y3D0 163 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 URGCP-MRPS24S4R325 110 aa12.89□□□□□ -0.35
CNOT9-201ENST00000273064 SPEM2Q0P670 501 aa12.88□□□□□ -0.35
CNOT9-201ENST00000273064 ZNF674Q2M3X9 581 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms