RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 FLNAP21333 2647 aaKnown RBP10.74□□□□□ -0.69
SS18-202ENST00000269138 DYSFO75923 2080 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 ANKRD61A6NGH8 418 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 ZNF732B4DXR9 585 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 ZNF12P17014 697 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 USF1P22415 310 aaPredicted RBP10.74□□□□□ -0.69
SS18-202ENST00000269138 SOX2P48431 317 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 CDH15P55291 814 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 MZT1Q08AG7 82 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 SPHARQ15513 63 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 BOLLQ8N9W6 283 aaKnown RBP10.74□□□□□ -0.69
SS18-202ENST00000269138 OR5A2Q8NGI9 324 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 Q8TCH9 128 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 NPRL2Q8WTW4 380 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 SMIM19Q96E16 107 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 PGLYRP3Q96LB9 341 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 ABCB9Q9NP78 766 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 NPTNQ9Y639 398 aa10.74□□□□□ -0.69
SS18-202ENST00000269138 IGKV1-9A0A0C4DH69 117 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 CDIPTO14735 213 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 ZNF20P17024 532 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 CELP19835 753 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 IL2RGP31785 369 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 GABARAPL2P60520 117 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 LOXL1Q08397 574 aaPredicted RBP10.73□□□□□ -0.69
SS18-202ENST00000269138 ZMYND11Q15326 602 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 MED22Q15528 200 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 ZNF181Q2M3W8 571 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 FAM76BQ5HYJ3 339 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 SCCPDHQ8NBX0 429 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 C19orf18Q8NEA5 215 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 OR11L1Q8NGX0 322 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 TRMT10AQ8TBZ6 339 aaKnown RBP10.73□□□□□ -0.69
SS18-202ENST00000269138 TSEN15Q8WW01 171 aaKnown RBP10.73□□□□□ -0.69
SS18-202ENST00000269138 RAB1CQ92928 201 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 ERGIC1Q969X5 290 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 TIMD4Q96H15 378 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 C18orf12Q96KH6 178 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 SMR3AQ99954 134 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 YTHDF1Q9BYJ9 559 aaKnown RBP10.73□□□□□ -0.69
SS18-202ENST00000269138 CHST5Q9GZS9 411 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 TLNRD1Q9H1K6 362 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 OR51I2Q9H344 312 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 ZNF281Q9Y2X9 895 aa10.73□□□□□ -0.69
SS18-202ENST00000269138 ZNF469Q96JG9 3925 aaPredicted RBP10.72□□□□□ -0.69
SS18-202ENST00000269138 hCG_1807616A0A1W2PRN6 198 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 PQLC2LA1A4F0 135 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 ISPDA4D126 451 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 TMEM210A6NLX4 147 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 IFNL4K9M1U5 179 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 PLPP2O43688 288 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 IGHV2-70P01814 119 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 INHBBP09529 407 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 EGR1P18146 543 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 TAS2R43P59537 309 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 RPS11P62280 158 aaKnown RBP eCLIP10.72□□□□□ -0.69
SS18-202ENST00000269138 GNG3P63215 75 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 ACSM1Q08AH1 577 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 WDR82Q6UXN9 313 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 CLDND2Q8NHS1 167 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 GPR148Q8TDV2 347 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 LRRC29Q8WV35 223 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 C10orf35Q96D05 121 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 ORAI1Q96D31 301 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 RNF7Q9UBF6 113 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 DHDHQ9UQ10 334 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 F8P00451 2351 aa10.72□□□□□ -0.69
SS18-202ENST00000269138 TANC2Q9HCD6 1990 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 IGKV1-27A0A075B6S5 117 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 FAM230AA0A1W2PPH8 454 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 OR5B21A6NL26 309 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 LRRC30A6NM36 301 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 RHBDL1O75783 438 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 SERPINA3P01011 423 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 HSMCR30P0CW71 290 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 IRF2P14316 349 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 ATF1P18846 271 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 CD80P33681 288 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 BTG1P62324 171 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 BDH1Q02338 343 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 EMX1Q04741 257 aaPredicted RBP10.71□□□□□ -0.69
SS18-202ENST00000269138 ASPHD2Q6ICH7 369 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 UTS2BQ765I0 119 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 RNF144BQ7Z419 303 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 PEG10Q86TG7 708 aaKnown RBP10.71□□□□□ -0.69
SS18-202ENST00000269138 LRRC28Q86X40 367 aaPredicted RBP10.71□□□□□ -0.69
SS18-202ENST00000269138 ANGPTL5Q86XS5 388 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 GCSAMQ8N6F7 178 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 DEFB108BQ8NET1 73 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 OR13C9Q8NGT0 318 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 PP6455Q8WZ26 134 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 HPS1Q92902 700 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 TMEM165Q9HC07 324 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 ACOT13Q9NPJ3 140 aa10.71□□□□□ -0.69
SS18-202ENST00000269138 MED13LQ71F56 2210 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 TRBV5-5A0A0J9YX44 114 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 SYNGR1O43759 233 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 GATBO75879 557 aaKnown RBP10.7□□□□□ -0.7
SS18-202ENST00000269138 LHBP01229 141 aa10.7□□□□□ -0.7
SS18-202ENST00000269138 RPSAP08865 295 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms