RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 PLCXD3Q63HM9 321 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 OR10K2Q6IF99 312 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 MOB3CQ70IA8 216 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 IZUMO1Q8IYV9 350 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 KCNG3Q8TAE7 436 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 BORCS8Q96FH0 119 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 THAP7Q9BT49 309 aaPredicted RBP12.13□□□□□ -0.47
SS18-201ENST00000269137 PAPOLGQ9BWT3 736 aaKnown RBP12.13□□□□□ -0.47
SS18-201ENST00000269137 BCL2L14Q9BZR8 327 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 ATG5Q9H1Y0 275 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 OR51B6Q9H340 312 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 TBC1D24Q9ULP9 559 aa12.13□□□□□ -0.47
SS18-201ENST00000269137 CADP27708 2225 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 METTL21EPA6NDL7 271 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 ZNF850A8MQ14 1090 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 CCKARP32238 428 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 ATP1B3P54709 279 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 TAS2R20P59543 309 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 PRDX4Q13162 271 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 ASAH1Q13510 395 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 FAM189A2Q15884 450 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 CDH24Q86UP0 819 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 CADM3Q8N126 398 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 OR1J1Q8NGS3 322 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 SMIM4Q8WVI0 70 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 TNFAIP8L1Q8WVP5 186 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 TRIM63Q969Q1 353 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 RFT1Q96AA3 541 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 PHF21AQ96BD5 680 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 CMBLQ96DG6 245 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 OR2J1Q9GZK6 312 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 OSGIN2Q9Y236 505 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 MPC1Q9Y5U8 109 aa12.12□□□□□ -0.47
SS18-201ENST00000269137 IGKV1-27A0A075B6S5 117 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 FAM230AA0A1W2PPH8 454 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 ANKRD30BLA7E2S9 258 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 SCGNO76038 276 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 KDM4BO94953 1096 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 NAAAQ02083 359 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 CEACAM21Q3KPI0 293 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 SPATA46Q5T0L3 261 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 RAB12Q6IQ22 244 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 ASCL4Q6XD76 172 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 C1QL2Q7Z5L3 287 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 ZDHHC23Q8IYP9 409 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 C19orf18Q8NEA5 215 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 SLC25A40Q8TBP6 338 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 YIPF5Q969M3 257 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 MARS2Q96GW9 593 aaKnown RBP12.11□□□□□ -0.47
SS18-201ENST00000269137 NPAP1Q9NZP6 1156 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 MRPL15Q9P015 296 aaKnown RBP12.11□□□□□ -0.47
SS18-201ENST00000269137 MYEF2Q9P2K5 600 aaKnown RBP12.11□□□□□ -0.47
SS18-201ENST00000269137 GPR160Q9UJ42 338 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 USP24Q9UPU5 2620 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 GABARAPH6UMI1 98 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 CCL21O00585 134 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 SELEP16581 610 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 CALCRP30988 508 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 ZNF83P51522 516 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 DGCR2P98153 550 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 OR2T2Q6IF00 324 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 SEZ6L2Q6UXD5 910 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 DNM1P46Q6ZS02 220 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 OR5A2Q8NGI9 324 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 OR5D18Q8NGL1 313 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 FAM46BQ96A09 425 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 NUDT16L1Q9BRJ7 211 aaKnown RBP12.11□□□□□ -0.47
SS18-201ENST00000269137 CST11Q9H112 138 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 CRIM1Q9NZV1 1036 aa12.11□□□□□ -0.47
SS18-201ENST00000269137 PQLC2LA1A4F0 135 aa12.1□□□□□ -0.47
SS18-201ENST00000269137 IQCF6A8MYZ5 107 aa12.1□□□□□ -0.47
SS18-201ENST00000269137 RAB27BO00194 218 aa12.1□□□□□ -0.47
SS18-201ENST00000269137 PLA2G10O15496 165 aa12.1□□□□□ -0.47
SS18-201ENST00000269137 CDC14BO60729 498 aa12.1□□□□□ -0.47
SS18-201ENST00000269137 TMEM104Q8NE00 496 aa12.1□□□□□ -0.47
SS18-201ENST00000269137 PXT1Q8NFP0 134 aa12.1□□□□□ -0.47
SS18-201ENST00000269137 KLF14Q8TD94 323 aaPredicted RBP12.1□□□□□ -0.47
SS18-201ENST00000269137 HPSE2Q8WWQ2 592 aa12.1□□□□□ -0.47
SS18-201ENST00000269137 ITPKCQ96DU7 683 aa12.1□□□□□ -0.47
SS18-201ENST00000269137 CCDC120Q96HB5 630 aa12.1□□□□□ -0.47
SS18-201ENST00000269137 S100A13Q99584 98 aa12.1□□□□□ -0.47
SS18-201ENST00000269137 ING4Q9UNL4 249 aa12.1□□□□□ -0.47
SS18-201ENST00000269137 RBMX2Q9Y388 322 aaKnown RBP12.1□□□□□ -0.47
SS18-201ENST00000269137 KALRNO60229 2985 aa12.1□□□□□ -0.47
SS18-201ENST00000269137 TRAV18A0A075B6X5 111 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 M0R1B8 84 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 LANCL1O43813 399 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 LILRA1O75019 489 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 CRYAAP02489 173 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 CHRM2P08172 466 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 TMEM225BP0DP42 221 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 SPNP16150 400 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 CHRNB4P30926 498 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 ERVS71-1P61550 626 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 PSG7Q13046 419 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 PDZK1IP1Q13113 114 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 SLC22A6Q4U2R8 563 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 C22orf34Q6ZV56 151 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 GDPD3Q7L5L3 318 aa12.09□□□□□ -0.47
SS18-201ENST00000269137 ZSCAN4Q8NAM6 433 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms