RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 KCNG3Q8TAE7 436 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 ERGIC1Q969X5 290 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 C14orf79Q96F83 325 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 CLCC1Q96S66 551 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 RSRP1Q9BUV0 290 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 LPAR3Q9UBY5 353 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 CPAMD8Q8IZJ3 1885 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 NCOR1O75376 2440 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 TTLL8A6PVC2 850 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 DUX1O43812 170 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 SNRNP70P08621 437 aaKnown RBP14.76□□□□□ -0.05
SQLE-201ENST00000265896 PGA4P0DJD7 388 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 PGA3P0DJD8 388 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 Q6ZRG5 221 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 ANKRD37Q7Z713 158 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 PLXDC1Q8IUK5 500 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 ZNF385AQ96PM9 386 aaKnown RBP14.76□□□□□ -0.05
SQLE-201ENST00000265896 NRIP2Q9BQI9 281 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 LIME1Q9H400 295 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 ZNF160Q9HCG1 818 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 SDHAF3Q9NRP4 125 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 TRAF3IP2O43734 574 aaPredicted RBP14.76□□□□□ -0.05
SQLE-201ENST00000265896 IGHMP01871 453 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 TMEM225BP0DP42 221 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 PHYHIPLQ96FC7 376 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 S100A13Q99584 98 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 MRPL13Q9BYD1 178 aaKnown RBP14.76□□□□□ -0.05
SQLE-201ENST00000265896 MYOZ1Q9NP98 299 aaPredicted RBP14.76□□□□□ -0.05
SQLE-201ENST00000265896 PIGLQ9Y2B2 252 aa14.76□□□□□ -0.05
SQLE-201ENST00000265896 FGF16O43320 207 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 PIAS2O75928 621 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 RD3LP0DJH9 198 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 PCK2Q16822 640 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 NKAIN1Q4KMZ8 207 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 SLC30A7Q8NEW0 376 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 NOXO1Q8NFA2 376 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 UQCC2Q9BRT2 126 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 RPS10P5Q9NQ39 176 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 FBXL17Q9UF56 701 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 DIDO1Q9BTC0 2240 aaKnown RBP14.75□□□□□ -0.05
SQLE-201ENST00000265896 SNAPC5O75971 98 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 CD79AP11912 226 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 APOBEC1P41238 236 aaKnown RBP14.75□□□□□ -0.05
SQLE-201ENST00000265896 PTGFRP43088 359 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 PJVKQ0ZLH3 352 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 RAB11FIP2Q7L804 512 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 SMRP1Q8NCR6 262 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 SLC25A43Q8WUT9 341 aaPredicted RBP14.75□□□□□ -0.05
SQLE-201ENST00000265896 IP6K3Q96PC2 410 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 USB1Q9BQ65 265 aaKnown RBP14.75□□□□□ -0.05
SQLE-201ENST00000265896 SULT4A1Q9BR01 284 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 SLC26A1Q9H2B4 701 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 PLEKHJ1Q9NW61 149 aa14.75□□□□□ -0.05
SQLE-201ENST00000265896 MAP1BP46821 2468 aaKnown RBP14.75□□□□□ -0.05
SQLE-201ENST00000265896 RNASEK-C17orf49H0YIS7 233 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 MFNGO00587 321 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 ATXN7O15265 892 aaPredicted RBP14.74□□□□□ -0.05
SQLE-201ENST00000265896 SRSF4Q08170 494 aaKnown RBP14.74□□□□□ -0.05
SQLE-201ENST00000265896 PLPPR5Q32ZL2 321 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 KRBOX4Q5JUW0 171 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 DHRS11Q6UWP2 260 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 ZNF574Q6ZN55 896 aaPredicted RBP14.74□□□□□ -0.05
SQLE-201ENST00000265896 DTWD2Q8NBA8 298 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 SUMF1Q8NBK3 374 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 HSD17B11Q8NBQ5 300 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 DCHS1Q96JQ0 3298 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 PI4KAP42356 2102 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 F8VVB4 439 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 F8VWA3 439 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 CPT2P23786 658 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 FCGR2CP31995 323 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 SNAI3Q3KNW1 292 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 PRSS54Q6PEW0 395 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 NMES1Q9C002 83 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 SLC5A7Q9GZV3 580 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 ALKBH4Q9NXW9 302 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 B3GALT5Q9Y2C3 310 aa14.74□□□□□ -0.05
SQLE-201ENST00000265896 RAB19A4D1S5 217 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 CSTBP04080 98 aaKnown RBP14.73□□□□□ -0.05
SQLE-201ENST00000265896 ARG1P05089 322 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 ZNF708P17019 499 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 HLA-GP17693 338 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 TMEM33P57088 247 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 ZNF528Q3MIS6 628 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 FAM76BQ5HYJ3 339 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 D2HGDHQ8N465 521 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 OR5L1Q8NGL2 311 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 OR11L1Q8NGX0 322 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 NANPQ8TBE9 248 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 PTX4Q96A99 478 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 NAA11Q9BSU3 229 aaPredicted RBP14.73□□□□□ -0.05
SQLE-201ENST00000265896 SH3BGRL3Q9H299 93 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 PNRC2Q9NPJ4 139 aaKnown RBP14.73□□□□□ -0.05
SQLE-201ENST00000265896 SRPK3Q9UPE1 567 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 A0A1W2PPE3 182 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 M0R036 132 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 TNFSF12O43508 249 aa14.73□□□□□ -0.05
SQLE-201ENST00000265896 MTRF1O75570 445 aaKnown RBP14.73□□□□□ -0.05
SQLE-201ENST00000265896 RPL12P30050 165 aaKnown RBP14.73□□□□□ -0.05
SQLE-201ENST00000265896 RBMXP38159 391 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms