RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 CPAMD8Q8IZJ3 1885 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 ZNF407Q9C0G0 2248 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 MBTPS2O43462 519 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 NME2P1O60361 137 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 NXPH3O95157 252 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 IGLV3-19P01714 112 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 SPP1P10451 314 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 PTGFRP43088 359 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 PPT1P50897 306 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 DEGS2Q6QHC5 323 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 DTWD2Q8NBA8 298 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 AKR1E2Q96JD6 320 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 DEFB126Q9BYW3 111 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 TAF9BQ9HBM6 251 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 PLEK2Q9NYT0 353 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 MYOTQ9UBF9 498 aa8.02□□□□□ -1.13
MSH4-201ENST00000263187 DBX1A6NMT0 343 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 CRYBA1P05813 215 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 FAM157CP0CG43 387 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 GLB1P16278 677 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 ITGA3P26006 1051 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 PTGER4P35408 488 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 MST1LQ2TV78 715 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 CCDC157Q569K6 752 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 C17orf82Q86X59 251 aaPredicted RBP8.01□□□□□ -1.13
MSH4-201ENST00000263187 SPAG16Q8N0X2 631 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 DEFB123Q8N688 67 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 NFAM1Q8NET5 270 aaPredicted RBP8.01□□□□□ -1.13
MSH4-201ENST00000263187 SEMA6DQ8NFY4 1073 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 OR56B1Q8NGI3 324 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 STOML3Q8TAV4 291 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 PTX4Q96A99 478 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 ISOC2Q96AB3 205 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 URM1Q9BTM9 101 aaKnown RBP8.01□□□□□ -1.13
MSH4-201ENST00000263187 MYOZ1Q9NP98 299 aaPredicted RBP8.01□□□□□ -1.13
MSH4-201ENST00000263187 WIF1Q9Y5W5 379 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 IGHV3-9P01782 118 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 SFTA3P0C7M3 94 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 OR8U9P0C7N5 309 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 CEBPGP53567 150 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 ZNF616Q08AN1 781 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 ZP4Q12836 540 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 SNAI3Q3KNW1 292 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 OGFOD3Q6PK18 319 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 WDSUB1Q8N9V3 476 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 OR8U1Q8NH10 309 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 RXFP4Q8TDU9 374 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 SECTM1Q8WVN6 248 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 MRPL24Q96A35 216 aaKnown RBP8.01□□□□□ -1.13
MSH4-201ENST00000263187 C12orf57Q99622 126 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 ESRP2Q9H6T0 727 aaKnown RBP8.01□□□□□ -1.13
MSH4-201ENST00000263187 PNRC2Q9NPJ4 139 aaKnown RBP8.01□□□□□ -1.13
MSH4-201ENST00000263187 PLA2G2EQ9NZK7 142 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 WNT16Q9UBV4 365 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 SRPK3Q9UPE1 567 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 PRELID3BQ9Y3B1 194 aa8.01□□□□□ -1.13
MSH4-201ENST00000263187 ZNF850A8MQ14 1090 aa8□□□□□ -1.13
MSH4-201ENST00000263187 C3orf80F5H4A9 247 aa8□□□□□ -1.13
MSH4-201ENST00000263187 MFNGO00587 321 aa8□□□□□ -1.13
MSH4-201ENST00000263187 BCAT2O15382 392 aaPredicted RBP8□□□□□ -1.13
MSH4-201ENST00000263187 CHRM2P08172 466 aa8□□□□□ -1.13
MSH4-201ENST00000263187 RBMXP38159 391 aaKnown RBP8□□□□□ -1.13
MSH4-201ENST00000263187 HFEQ30201 348 aa8□□□□□ -1.13
MSH4-201ENST00000263187 PLPP5Q8NEB5 264 aa8□□□□□ -1.13
MSH4-201ENST00000263187 PHYHIPLQ96FC7 376 aa8□□□□□ -1.13
MSH4-201ENST00000263187 RASL10BQ96S79 203 aa8□□□□□ -1.13
MSH4-201ENST00000263187 PECRQ9BY49 303 aa8□□□□□ -1.13
MSH4-201ENST00000263187 SLC26A1Q9H2B4 701 aa8□□□□□ -1.13
MSH4-201ENST00000263187 LIME1Q9H400 295 aa8□□□□□ -1.13
MSH4-201ENST00000263187 RCL1Q9Y2P8 373 aaKnown RBP8□□□□□ -1.13
MSH4-201ENST00000263187 AMDHD2Q9Y303 409 aa8□□□□□ -1.13
MSH4-201ENST00000263187 PMS2P1A4D2B8 440 aa8□□□□□ -1.13
MSH4-201ENST00000263187 MTRF1O75570 445 aaKnown RBP8□□□□□ -1.13
MSH4-201ENST00000263187 GLAP06280 429 aa8□□□□□ -1.13
MSH4-201ENST00000263187 PTGDSP41222 190 aa8□□□□□ -1.13
MSH4-201ENST00000263187 MTCP1P56278 107 aa8□□□□□ -1.13
MSH4-201ENST00000263187 SRSF4Q08170 494 aaKnown RBP8□□□□□ -1.13
MSH4-201ENST00000263187 SPEM2Q0P670 501 aa8□□□□□ -1.13
MSH4-201ENST00000263187 PRSS54Q6PEW0 395 aa8□□□□□ -1.13
MSH4-201ENST00000263187 CPEB2Q7Z5Q1 589 aaKnown RBP8□□□□□ -1.13
MSH4-201ENST00000263187 OR10Z1Q8NGY1 313 aa8□□□□□ -1.13
MSH4-201ENST00000263187 OR14K1Q8NGZ2 314 aa8□□□□□ -1.13
MSH4-201ENST00000263187 ERGIC1Q969X5 290 aa8□□□□□ -1.13
MSH4-201ENST00000263187 NMES1Q9C002 83 aa8□□□□□ -1.13
MSH4-201ENST00000263187 UCK1Q9HA47 277 aa8□□□□□ -1.13
MSH4-201ENST00000263187 OCIAD1Q9NX40 245 aa8□□□□□ -1.13
MSH4-201ENST00000263187 LPAR3Q9UBY5 353 aa8□□□□□ -1.13
MSH4-201ENST00000263187 C14orf166Q9Y224 244 aaKnown RBP8□□□□□ -1.13
MSH4-201ENST00000263187 GPR179Q6PRD1 2367 aa8□□□□□ -1.13
MSH4-201ENST00000263187 C10orf142B7Z368 130 aa8□□□□□ -1.13
MSH4-201ENST00000263187 CD37P11049 281 aa8□□□□□ -1.13
MSH4-201ENST00000263187 HLA-GP17693 338 aa8□□□□□ -1.13
MSH4-201ENST00000263187 FCGR2CP31995 323 aa8□□□□□ -1.13
MSH4-201ENST00000263187 TAS2R31P59538 309 aa8□□□□□ -1.13
MSH4-201ENST00000263187 CCL7P80098 99 aa8□□□□□ -1.13
MSH4-201ENST00000263187 Q6ZRG5 221 aa8□□□□□ -1.13
MSH4-201ENST00000263187 SUMF1Q8NBK3 374 aa8□□□□□ -1.13
MSH4-201ENST00000263187 SLC30A7Q8NEW0 376 aa8□□□□□ -1.13
MSH4-201ENST00000263187 OR5L1Q8NGL2 311 aa8□□□□□ -1.13
MSH4-201ENST00000263187 NECAB3Q96P71 396 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms