RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 A0A0A6YYJ9 748 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 DPRXA6NFQ7 191 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 PLPP2O43688 288 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 ZNF35P13682 527 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 TAS2R43P59537 309 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 SPATA46Q5T0L3 261 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 ZNF676Q8N7Q3 588 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 OR51E1Q8TCB6 317 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 RPS4Y2Q8TD47 263 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 OR51E2Q9H255 320 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 STARD10Q9Y365 291 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 MFSD2BA6NFX1 497 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 CSF3P09919 207 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 EPXP11678 715 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 PPP3CBP16298 524 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 C4BPBP20851 252 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 PTBP1P26599 531 aaKnown RBP eCLIP23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 EXOSC2Q13868 293 aaKnown RBP23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 FAM169BQ8N8A8 192 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 OR5AK2Q8NH90 309 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 ABHD4Q8TB40 342 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 LYZL4Q96KX0 146 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 C1QTNF5Q9BXJ0 243 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 GHITMQ9H3K2 345 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 MCUBQ9NWR8 336 aa23.71■■□□□ 1.39
SMARCD3-201ENST00000262188 ST8SIA5O15466 376 aa23.7■■□□□ 1.38
SMARCD3-201ENST00000262188 CD40P25942 277 aa23.7■■□□□ 1.38
SMARCD3-201ENST00000262188 BSPH1Q075Z2 132 aa23.7■■□□□ 1.38
SMARCD3-201ENST00000262188 KCNS3Q9BQ31 491 aa23.7■■□□□ 1.38
SMARCD3-201ENST00000262188 CRIM1Q9NZV1 1036 aa23.7■■□□□ 1.38
SMARCD3-201ENST00000262188 SF3B6Q9Y3B4 125 aaKnown RBP23.7■■□□□ 1.38
SMARCD3-201ENST00000262188 ANKHD1Q8IWZ3 2542 aaKnown RBP23.7■■□□□ 1.38
SMARCD3-201ENST00000262188 UTP20O75691 2785 aaKnown RBP23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 SIAH2O43255 324 aa23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 LMX1BO60663 402 aa23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 RAB13P51153 203 aa23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 GLYATL3Q5SZD4 288 aa23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 COMMD2Q86X83 199 aa23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 PIAS4Q8N2W9 510 aaPredicted RBP23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 CHCHD6Q9BRQ6 235 aa23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 NDUFB11Q9NX14 153 aa23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 TENM4Q6N022 2769 aa23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 MPTX1A8MV57 137 aa23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 ARSBP15848 533 aa23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 HLXQ14774 488 aaPredicted RBP23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 COLCA1Q6ZS62 124 aa23.69■■□□□ 1.38
SMARCD3-201ENST00000262188 PLA2G10O15496 165 aa23.68■■□□□ 1.38
SMARCD3-201ENST00000262188 SMPD2O60906 423 aa23.68■■□□□ 1.38
SMARCD3-201ENST00000262188 CCR9P51686 369 aa23.68■■□□□ 1.38
SMARCD3-201ENST00000262188 RPS11P62280 158 aaKnown RBP eCLIP23.68■■□□□ 1.38
SMARCD3-201ENST00000262188 CREB3L1Q96BA8 519 aa23.68■■□□□ 1.38
SMARCD3-201ENST00000262188 PHF21AQ96BD5 680 aa23.68■■□□□ 1.38
SMARCD3-201ENST00000262188 ORAI1Q96D31 301 aa23.68■■□□□ 1.38
SMARCD3-201ENST00000262188 REG4Q9BYZ8 158 aa23.68■■□□□ 1.38
SMARCD3-201ENST00000262188 GPR84Q9NQS5 396 aa23.68■■□□□ 1.38
SMARCD3-201ENST00000262188 SPTAN1Q13813 2472 aaKnown RBP23.68■■□□□ 1.38
SMARCD3-201ENST00000262188 LOC107986453A0A1B0GWG9 222 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 A6NIN4 97 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 H2AFB1P0C5Y9 115 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 H2AFB2P0C5Z0 115 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 ARHGDIBP52566 201 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 ZNF92Q03936 586 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 SSC4DQ8WTU2 575 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 PLPPR2Q96GM1 343 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 FAM71F1Q96KD3 344 aaPredicted RBP23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 MGAT4AQ9UM21 535 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 A0A1B0GTI1 187 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 A0A1W2PPK0 400 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 A1L4Q6 167 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 GPRIN2O60269 458 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 FABP5Q01469 135 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 TUSC1Q2TAM9 212 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 OR1J2Q8NGS2 313 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 ST8SIA2Q92186 375 aa23.67■■□□□ 1.38
SMARCD3-201ENST00000262188 TMEM212A6NML5 194 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 A8MXK9 166 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 IFNA4P05014 189 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 SOX2P48431 317 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 UCP2P55851 309 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 FAM131AQ6UXB0 335 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 TMEM108Q6UXF1 575 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 EIF4E3Q8N5X7 224 aaKnown RBP23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 COMMD4Q9H0A8 199 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 OR10A2Q9H208 303 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 RNF167Q9H6Y7 350 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 MOB1AQ9H8S9 216 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 SDHAF2Q9NX18 166 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 FZR1Q9UM11 496 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 ZNF281Q9Y2X9 895 aa23.66■■□□□ 1.38
SMARCD3-201ENST00000262188 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.65■■□□□ 1.38
SMARCD3-201ENST00000262188 FABP7O15540 132 aa23.65■■□□□ 1.38
SMARCD3-201ENST00000262188 CRYAAP02489 173 aa23.65■■□□□ 1.38
SMARCD3-201ENST00000262188 FAM27D1Q5T7N8 215 aa23.65■■□□□ 1.38
SMARCD3-201ENST00000262188 ADAM5Q6NVV9 412 aa23.65■■□□□ 1.38
SMARCD3-201ENST00000262188 APOBEC3DQ96AK3 386 aaPredicted RBP23.65■■□□□ 1.38
SMARCD3-201ENST00000262188 REEP6Q96HR9 211 aa23.65■■□□□ 1.38
SMARCD3-201ENST00000262188 LINC00052Q96N35 136 aa23.65■■□□□ 1.38
SMARCD3-201ENST00000262188 LRRK2Q5S007 2527 aa23.65■■□□□ 1.38
SMARCD3-201ENST00000262188 GPX5O75715 221 aa23.65■■□□□ 1.38
SMARCD3-201ENST00000262188 METAP1DQ6UB28 335 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms