RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ABLIM3O94929 683 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 HTN1P15515 57 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 CD1EP15812 388 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 ABCD3P28288 659 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 PSMB2P49721 201 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 LIMK1P53667 647 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 SP6Q3SY56 376 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 ZNF260Q3ZCT1 412 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 ZNF429Q86V71 674 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 HGDQ93099 445 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 PHF7Q9BWX1 381 aaPredicted RBP12.85□□□□□ -0.35
CUX2-201ENST00000261726 POMT1Q9Y6A1 747 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 OR4C16Q8NGL9 310 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 TTC9Q92623 222 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 HSD17B10Q99714 261 aaKnown RBP12.85□□□□□ -0.35
CUX2-201ENST00000261726 RREB1Q92766 1687 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 FCGR3BO75015 233 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 SFTA3P0C7M3 94 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 COX7A1P24310 79 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 TUSC5Q8IXB3 177 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 ZAR1LA6NP61 321 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 MMP7P09237 267 aaPredicted RBP12.85□□□□□ -0.35
CUX2-201ENST00000261726 CAPZBP47756 277 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 RANP62826 216 aaKnown RBP12.85□□□□□ -0.35
CUX2-201ENST00000261726 CDK5R1Q15078 307 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 ANGPTL6Q8NI99 470 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 UBE2ZQ9H832 354 aaPredicted RBP12.85□□□□□ -0.35
CUX2-201ENST00000261726 MYO9BQ13459 2157 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 SLC25A35Q3KQZ1 300 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 TMEM65Q6PI78 240 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 LYPD8Q6UX82 237 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 LYG1Q8N1E2 194 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 EXTL1Q92935 676 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 SLC2A9Q9NRM0 540 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 KLK11Q9UBX7 282 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 NAT8BQ9UHF3 227 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 UFC1Q9Y3C8 167 aa12.85□□□□□ -0.35
CUX2-201ENST00000261726 FRG2CA6NGY1 282 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 KIAA1324LA8MWY0 1029 aaPredicted RBP12.84□□□□□ -0.35
CUX2-201ENST00000261726 HOXC11O43248 304 aaPredicted RBP12.84□□□□□ -0.35
CUX2-201ENST00000261726 GALR1P47211 349 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 ZNF788Q6ZQV5 615 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 TGIF2LYQ8IUE0 185 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 C20orf196Q8IYI0 205 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 LILRB1Q8NHL6 650 aaPredicted RBP12.84□□□□□ -0.35
CUX2-201ENST00000261726 J3KRW8 73 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 DHHO43323 396 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 HIST1H3AP68431 136 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 MOGAT2Q3SYC2 334 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 XKR7Q5GH72 579 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 TMEM56Q96MV1 263 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 C20orf141Q9NUB4 165 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 AP5S1Q9NUS5 200 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 ALX3O95076 343 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 PRSS3P2Q8NHM4 247 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 MYH9P35579 1960 aaKnown RBP12.84□□□□□ -0.35
CUX2-201ENST00000261726 UPK1AO00322 258 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 LIMS3P0CW19 117 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 LIMS4P0CW20 117 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 Q6ZNX1 250 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 ZNF561Q8N587 486 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 TMEM37Q8WXS4 190 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 CXorf58Q96LI9 332 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 DERL3Q96Q80 235 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 RHOFQ9HBH0 211 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 IGLV3-10A0A075B6K4 115 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 A0A1B0GTQ1 180 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 A0A1W2PRD5 423 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 A0A1W2PRF3 423 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 A0A1W2PRM7 423 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 BCL2L11O43521 198 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 RAB7AP51149 207 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 GSG1Q2KHT4 349 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 MAMSTRQ6ZN01 415 aa12.84□□□□□ -0.35
CUX2-201ENST00000261726 CBR3O75828 277 aa12.83□□□□□ -0.35
CUX2-201ENST00000261726 CLDN20P56880 219 aa12.83□□□□□ -0.35
CUX2-201ENST00000261726 PJVKQ0ZLH3 352 aa12.83□□□□□ -0.35
CUX2-201ENST00000261726 OR1C1Q15619 314 aa12.83□□□□□ -0.35
CUX2-201ENST00000261726 OR5D13Q8NGL4 314 aa12.83□□□□□ -0.35
CUX2-201ENST00000261726 CCL17Q92583 94 aa12.83□□□□□ -0.35
CUX2-201ENST00000261726 GABARAPL3Q9BY60 117 aa12.83□□□□□ -0.35
CUX2-201ENST00000261726 SLC25A22Q9H936 323 aa12.83□□□□□ -0.35
CUX2-201ENST00000261726 OR5V1Q9UGF6 321 aa12.83□□□□□ -0.35
CUX2-201ENST00000261726 IGHV3-13P01766 116 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 IGHV3-7P01780 117 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 OR3A4PP47883 348 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 MICBQ29980 383 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 WIPI1Q5MNZ9 446 aaPredicted RBP12.83□□□□□ -0.36
CUX2-201ENST00000261726 IGHV3-43A0A0B4J1X8 118 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 MS4A18H0YCH9 400 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 MASP2O00187 686 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 FZD6O60353 706 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 IGHV3-43DP0DP04 118 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 HTR1DP28221 377 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 CEBPEQ15744 281 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 MS4A18Q3C1V0 323 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 TDHQ8IZJ6 230 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 MYOZ1Q9NP98 299 aaPredicted RBP12.83□□□□□ -0.36
CUX2-201ENST00000261726 TNFRSF1AP19438 455 aa12.83□□□□□ -0.36
CUX2-201ENST00000261726 ABI3BPQ7Z7G0 1075 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms