RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PIPP12273 146 aaPredicted RBP6.85□□□□□ -1.31
GPNMB-201ENST00000258733 LMO1P25800 156 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 HTR1FP30939 366 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 LPAR6P43657 344 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 TP53I3Q53FA7 332 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 RAB41Q5JT25 222 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 C11orf87Q6NUJ2 197 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 RNASEKQ6P5S7 137 aaKnown RBP6.85□□□□□ -1.31
GPNMB-201ENST00000258733 TMEM251Q8N6I4 163 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 IQCF1Q8N6M8 205 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 GPR32P1Q8NGA4 272 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 SNIP1Q8TAD8 396 aaKnown RBP6.85□□□□□ -1.31
GPNMB-201ENST00000258733 RCHY1Q96PM5 261 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 ATOH8Q96SQ7 321 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 SLC25A51Q9H1U9 297 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 OR52D1Q9H346 318 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 UBTD1Q9HAC8 227 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 UBE2TQ9NPD8 197 aaPredicted RBP6.85□□□□□ -1.31
GPNMB-201ENST00000258733 GPR132Q9UNW8 380 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 FEZF1A0PJY2 475 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 MBLAC1A4D2B0 266 aaPredicted RBP6.84□□□□□ -1.31
GPNMB-201ENST00000258733 RAMP1O60894 148 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 C8orf89P0DMQ9 161 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 RPS25P62851 125 aaKnown RBP6.84□□□□□ -1.31
GPNMB-201ENST00000258733 COL10A1Q03692 680 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 DCAF4L1Q3SXM0 396 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 DCST2Q5T1A1 773 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 C17orf99Q6UX52 265 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 LSRQ86X29 649 aaPredicted RBP6.84□□□□□ -1.31
GPNMB-201ENST00000258733 TMEM174Q8WUU8 243 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 WDR34Q96EX3 536 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 NXF5Q9H1B4 397 aaKnown RBP6.84□□□□□ -1.31
GPNMB-201ENST00000258733 SCML2Q9UQR0 700 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 B3GALT5Q9Y2C3 310 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 NTNG1Q9Y2I2 539 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 MRPS16Q9Y3D3 137 aaKnown RBP6.84□□□□□ -1.31
GPNMB-201ENST00000258733 WIPI2Q9Y4P8 454 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 TRAV8-7A0A075B6U6 113 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 ASPDHA6ND91 283 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 NPEPPSL1A6NEC2 478 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 OR2T8A6NH00 312 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 MPZL1O95297 269 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 CD8AP01732 235 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 SERPINE2P07093 398 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 SBK3P0C264 359 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 CT45A8P0DMV1 189 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 CT45A9P0DMV2 189 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 PTGER1P34995 402 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 PGFP49763 221 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 UCNP55089 124 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 DYNLT1P63172 113 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 NTHL1P78549 312 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 SCAPQ12770 1279 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 PDGFRLQ15198 375 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 ITPRIPL2Q3MIP1 535 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 TMEM176BQ3YBM2 270 aaPredicted RBP6.84□□□□□ -1.31
GPNMB-201ENST00000258733 TRMT12Q53H54 448 aaKnown RBP6.84□□□□□ -1.31
GPNMB-201ENST00000258733 CT45A2Q5DJT8 189 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 TMEM69Q5SWH9 247 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 SLC36A1Q7Z2H8 476 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 BLIDQ8IZY5 108 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 ZNF709Q8N972 641 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 OR4B1Q8NGF8 309 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 MFSD8Q8NHS3 518 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 ZNF418Q8TF45 676 aaPredicted RBP6.84□□□□□ -1.31
GPNMB-201ENST00000258733 TM4SF19Q96DZ7 209 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 PYURFQ96I23 114 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 DGAT2Q96PD7 388 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 MAP1LC3CQ9BXW4 147 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 A4GALTQ9NPC4 353 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 TMEM9BQ9NQ34 198 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 SDR39U1Q9NRG7 319 aaPredicted RBP6.84□□□□□ -1.31
GPNMB-201ENST00000258733 COMMD9Q9P000 198 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 TESQ9UGI8 421 aaKnown RBP6.84□□□□□ -1.31
GPNMB-201ENST00000258733 ICAM5Q9UMF0 924 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 FUT9Q9Y231 359 aa6.84□□□□□ -1.31
GPNMB-201ENST00000258733 LTBP1Q14766 1721 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 A0A0B4J2A0 478 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 UBL3O95164 117 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 CSN2P05814 226 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 MMP9P14780 707 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 CDKN2BP42772 138 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 MTPNP58546 118 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 SCD5Q86SK9 330 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 C20orf196Q8IYI0 205 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 INO80EQ8NBZ0 244 aaPredicted RBP6.83□□□□□ -1.32
GPNMB-201ENST00000258733 OR5W2Q8NH69 310 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 FNDC9Q8TBE3 224 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 LINC01599Q8WXQ3 324 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 PLD4Q96BZ4 506 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 ZFP3Q96NJ6 502 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 C19orf24Q9BVV8 132 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 RNF39Q9H2S5 420 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 DCAF13Q9NV06 445 aaKnown RBP6.83□□□□□ -1.32
GPNMB-201ENST00000258733 SHPKQ9UHJ6 478 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 A0A0G2JMM0 328 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 TMEM272A0A1B0GTI8 110 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 A0A1W2PPB8 328 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 KIR3DP1A8MWS1 328 aa6.83□□□□□ -1.32
GPNMB-201ENST00000258733 C1QTNF9BB2RNN3 333 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms