RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 SSX3Q99909 188 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 NELFAQ9H3P2 528 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 ARID1BQ8NFD5 2236 aaPredicted RBP10.16□□□□□ -0.78
TROAP-201ENST00000257909 CHD9Q3L8U1 2897 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 OR5H15A6NDH6 313 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 TLCD2A6NGC4 264 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 OR5H1A6NKK0 313 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 ADAM10O14672 748 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 TERTO14746 1132 aaKnown RBP10.15□□□□□ -0.78
TROAP-201ENST00000257909 HCRTR1O43613 425 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 NPIPB7O75200 414 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 PTBP3O95758 552 aaKnown RBP10.15□□□□□ -0.78
TROAP-201ENST00000257909 NUDT14O95848 222 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 TAGLN2P37802 199 aaKnown RBP10.15□□□□□ -0.78
TROAP-201ENST00000257909 SPCS3P61009 180 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 RAB4BP61018 213 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 GAMTQ14353 236 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 FAM78AQ5JUQ0 283 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 GALNTL5Q7Z4T8 443 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 SPRED2Q7Z698 418 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 BANF2Q9H503 90 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 FAM86C1Q9NVL1 165 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 H3BQ15 152 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 CTSDP07339 412 aaPredicted RBP10.15□□□□□ -0.78
TROAP-201ENST00000257909 DHPSP49366 369 aaPredicted RBP10.15□□□□□ -0.78
TROAP-201ENST00000257909 POLR2HP52434 150 aaKnown RBP10.15□□□□□ -0.78
TROAP-201ENST00000257909 GPM6BQ13491 265 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 SPNS3Q6ZMD2 512 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 OR8G5Q8NG78 346 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 Q8WTZ3 238 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 SLAMF6Q96DU3 332 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 TMEM68Q96MH6 324 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 ADOQ96SZ5 270 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 C2orf88Q9BSF0 95 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 FOXQ1Q9C009 403 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 NXF5Q9H1B4 397 aaKnown RBP10.15□□□□□ -0.78
TROAP-201ENST00000257909 OR10A2Q9H208 303 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 WFDC1Q9HC57 220 aa10.15□□□□□ -0.78
TROAP-201ENST00000257909 ARHGEF17Q96PE2 2063 aaPredicted RBP10.15□□□□□ -0.78
TROAP-201ENST00000257909 TMED7-TICAM2A0A0A6YYA0 188 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 LINC01553A4QN01 128 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 BTBD17A6NE02 478 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 CRYM-AS1A6NIL9 109 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 ZNF724A8MTY0 619 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 K7N7A8 449 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 RAMP1O60894 148 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 CRTAPO75718 401 aaPredicted RBP10.14□□□□□ -0.79
TROAP-201ENST00000257909 C1QL1O75973 258 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 AHSA1O95433 338 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 HEXBP07686 556 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 SERPINA2P20848 420 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 PPP1CCP36873 323 aaKnown RBP10.14□□□□□ -0.79
TROAP-201ENST00000257909 OR3A4PP47883 348 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 UBE2KP61086 200 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 ARL6IP1Q15041 203 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 DEFB110Q30KQ9 67 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 KHDC3LQ587J8 217 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 FAM213BQ8TBF2 198 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 M1APQ8TC57 530 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 MRPL24Q96A35 216 aaKnown RBP10.14□□□□□ -0.79
TROAP-201ENST00000257909 RAB39BQ96DA2 213 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 LURAP1Q96LR2 239 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 SPACA5Q96QH8 159 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 MOB1AQ9H8S9 216 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 FAM60AQ9NP50 221 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 RBFOX3A6NFN3 312 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 ZNF726A6NNF4 738 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 C17orf105B2RV13 164 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 SOX1O00570 391 aaPredicted RBP10.14□□□□□ -0.79
TROAP-201ENST00000257909 NSA2O95478 260 aaKnown RBP10.14□□□□□ -0.79
TROAP-201ENST00000257909 GNRH1P01148 92 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 MBPP02686 304 aaPredicted RBP10.14□□□□□ -0.79
TROAP-201ENST00000257909 SOD3P08294 240 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 CXCL1P09341 107 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 NDUFB7P17568 137 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 GJA4P35212 333 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 APOBEC1P41238 236 aaKnown RBP10.14□□□□□ -0.79
TROAP-201ENST00000257909 GABRA4P48169 554 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 CLEC9AQ6UXN8 241 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 DMRTC2Q8IXT2 367 aaPredicted RBP10.14□□□□□ -0.79
TROAP-201ENST00000257909 OR5AS1Q8N127 324 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 FAM89BQ8N5H3 189 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 HPSE2Q8WWQ2 592 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 FAM131CQ96AQ9 280 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 SLC46A1Q96NT5 459 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 GPR61Q9BZJ8 451 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 TCFL5Q9UL49 500 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 ZDHHC8Q9ULC8 765 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 KCNIP3Q9Y2W7 256 aa10.14□□□□□ -0.79
TROAP-201ENST00000257909 FRG2CA6NGY1 282 aa10.13□□□□□ -0.79
TROAP-201ENST00000257909 ZNF727A8MUV8 499 aa10.13□□□□□ -0.79
TROAP-201ENST00000257909 SERPINE3A8MV23 424 aa10.13□□□□□ -0.79
TROAP-201ENST00000257909 CTSBP07858 339 aa10.13□□□□□ -0.79
TROAP-201ENST00000257909 HCKP08631 526 aa10.13□□□□□ -0.79
TROAP-201ENST00000257909 DAP3P51398 398 aaKnown RBP10.13□□□□□ -0.79
TROAP-201ENST00000257909 SLC37A1P57057 533 aa10.13□□□□□ -0.79
TROAP-201ENST00000257909 LSM6P62312 80 aaKnown RBP10.13□□□□□ -0.79
TROAP-201ENST00000257909 FMODQ06828 376 aa10.13□□□□□ -0.79
TROAP-201ENST00000257909 IL13RA2Q14627 380 aa10.13□□□□□ -0.79
TROAP-201ENST00000257909 PPA1Q15181 289 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms