RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ZNF799Q96GE5 643 aa12.85□□□□□ -0.35
TRAFD1-201ENST00000257604 TSNAXQ99598 290 aaKnown RBP12.85□□□□□ -0.35
TRAFD1-201ENST00000257604 GLS2Q9UI32 602 aa12.85□□□□□ -0.35
TRAFD1-201ENST00000257604 EXPH5Q8NEV8 1989 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 PMP2P02689 132 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 GABRR1P24046 479 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 ADH6P28332 368 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 FOXG1P55316 489 aaPredicted RBP12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 B2MP61769 119 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 SLC25A53Q5H9E4 307 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 C1QL2Q7Z5L3 287 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 ZNF584Q8IVC4 421 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 FOXRED2Q8IWF2 684 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 SULF2Q8IWU5 870 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 NKX6-2Q9C056 277 aaPredicted RBP12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 MED9Q9NWA0 146 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 TRAV20A0A0B4J274 112 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 A0A1W2PR80 420 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 LRRC3CA6NJW4 275 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 SOCS1O15524 211 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 OR4E1P0C645 316 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 VSIG8P0DPA2 414 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 ZNF32P17041 273 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 CXADRP78310 365 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 C21orf62-AS1Q17RA5 79 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 SLC16A14Q7RTX9 510 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 FJX1Q86VR8 437 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 C20orf196Q8IYI0 205 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 ZIC4Q8N9L1 334 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 GJC3Q8NFK1 279 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 OR1S2Q8NGQ3 325 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 FGFBP3Q8TAT2 258 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 CMTM3Q96MX0 182 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 NELFAQ9H3P2 528 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 CADP27708 2225 aa12.84□□□□□ -0.35
TRAFD1-201ENST00000257604 IGLV3-32A0A0A0MS00 114 aa12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 ZNF736B4DX44 427 aaPredicted RBP12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 F5H0A9 414 aaPredicted RBP12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 SPRY1O43609 319 aaPredicted RBP12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 HTR3BO95264 441 aa12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 AKAIN1P0CW23 69 aa12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 LY6G6FQ5SQ64 297 aa12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 RAB12Q6IQ22 244 aa12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 ZNF813Q6ZN06 617 aa12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 TMEM200AQ86VY9 491 aa12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 BPIFB2Q8N4F0 458 aa12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 C12orf45Q8N5I9 185 aaPredicted RBP12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 OR6K3Q8NGY3 331 aa12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 SEH1LQ96EE3 360 aa12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 VRK1Q99986 396 aaPredicted RBP12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 OR2S2Q9NQN1 319 aa12.83□□□□□ -0.35
TRAFD1-201ENST00000257604 A0A1B0GTI1 187 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 RAB19A4D1S5 217 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 OR5H14A6NHG9 310 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 SGCEO43556 437 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 SRSF10O75494 262 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 TMEM225BP0DP42 221 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 AKR1C4P17516 323 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 CBX5P45973 191 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 CAPZA1P52907 286 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 ATP1B3P54709 279 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 MRPS10P82664 201 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 UNC119Q13432 240 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 SHEQ5VZ18 495 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 GABRG1Q8N1C3 465 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 SLC22A24Q8N4F4 322 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 TMEM82A0PJX8 343 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 FAM221AA4D161 298 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 PMS2P2O95744 297 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 CSF1P09603 554 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 CD79AP11912 226 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 SRD5A2P31213 254 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 ARG2P78540 354 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 FDX2Q6P4F2 183 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 TUSC5Q8IXB3 177 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 OR51T1Q8NGJ9 327 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 OR2V1Q8NHB1 315 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 NOSIPQ9Y314 301 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 FLVCR1Q9Y5Y0 555 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 NCKAP5O14513 1909 aa12.83□□□□□ -0.36
TRAFD1-201ENST00000257604 ATMQ13315 3056 aa12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 MEGF11A6BM72 1044 aa12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 RFPL4AA6NLU0 287 aa12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 C3orf80F5H4A9 247 aa12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 RFPL4AL1F8VTS6 287 aa12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 SDCBPO00560 298 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 NKX2-8O15522 239 aa12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 NDUFA2O43678 99 aa12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 MRPL33O75394 65 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 ONECUT2O95948 504 aa12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 HLA-HP01893 362 aa12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 CALCRP30988 508 aa12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 RAC3P60763 192 aa12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 ENDOGQ14249 297 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 CMSS1Q9BQ75 279 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 PARP12Q9H0J9 701 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 ZNF701Q9NV72 531 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 A0A087WZY1 265 aa12.82□□□□□ -0.36
TRAFD1-201ENST00000257604 KANTRA0A1W2PQU2 76 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms