RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 I3L1I5 382 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 GPR31O00270 319 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 CCSO14618 274 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SCAMP1O15126 338 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 AKR7A3O95154 331 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 HEXBP07686 556 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 IGFBP3P17936 291 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 NFYBP25208 207 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 LAP3P28838 519 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 P2RY4P51582 365 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 GNB2P62879 340 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SLC35A1P78382 337 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 C21orf62-AS1Q17RA5 79 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 MOGAT2Q3SYC2 334 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 GXYLT1Q4G148 440 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 TRIM61Q5EBN2 209 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF385CQ66K41 422 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 CORO6Q6QEF8 472 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 PLXDC2Q6UX71 529 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 COX15Q7KZN9 410 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SSX9Q7RTT3 188 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 LDLRAD3Q86YD5 345 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 CMTM1Q8IZ96 169 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 NANPQ8TBE9 248 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 VDAC3Q9Y277 283 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 UBE2J1Q9Y385 318 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 LOC390937A0A1W2PQ73 354 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 FTCDNL1E5RQL4 147 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SOX15O60248 233 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 VAMP5O95183 116 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 DDAH2O95865 285 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 PMP2P02689 132 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 HOXB5P09067 269 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 TDGF1P13385 188 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 RAB4AP20338 218 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 OR1D4P47884 311 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SQSTM1Q13501 440 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 TAF9Q16594 264 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF260Q3ZCT1 412 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ABHD12BQ7Z5M8 362 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 PLXDC1Q8IUK5 500 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SLC38A9Q8NBW4 561 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ADPRHL1Q8NDY3 354 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 PLPP5Q8NEB5 264 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF519Q8TB69 540 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 MARCH1Q8TCQ1 289 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 PTPMT1Q8WUK0 201 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SLAMF6Q96DU3 332 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SMIM8Q96KF7 97 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 PAPOLGQ9BWT3 736 aaKnown RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SPACA1Q9HBV2 294 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 C19orf12Q9NSK7 152 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 CGGBP1Q9UFW8 167 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 DMRT1Q9Y5R6 373 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 IGLV3-12A0A075B6K2 115 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 FAM74A7A6NL05 159 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 C4orf47A7E2U8 309 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 P2RY10O00398 339 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 PGA3P0DJD8 388 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SLC2A1P11166 492 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 RAB5AP20339 215 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 RRADP55042 308 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 GABREP78334 506 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 NR0B2Q15466 257 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 OR8B8Q15620 311 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SSX2Q16385 188 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 FAM74A3Q4VXF1 159 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ABHD17BQ5VST6 288 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 DCAF12L2Q5VW00 463 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 TMEM88Q6PEY1 159 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SPNS3Q6ZMD2 512 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF695Q8IW36 515 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 FOXRED2Q8IWF2 684 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 UBAC2Q8NBM4 344 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 OR4N2Q8NGD1 307 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 OR13C9Q8NGT0 318 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 GCDHQ92947 438 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 MRGPRFQ96AM1 343 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SPSB1Q96BD6 273 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ARSGQ96EG1 525 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 TVP23CQ96ET8 276 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 TGM7Q96PF1 710 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 TSSK2Q96PF2 358 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SLC5A7Q9GZV3 580 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 PBOV1Q9GZY1 135 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 LRIT1Q9P2V4 623 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 TRAV8-7A0A075B6U6 113 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ANKUB1A6NFN9 424 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 EIF1BO60739 113 aaKnown RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 LRP3O75074 770 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 KLF8O95600 359 aaPredicted RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SEMA4FO95754 770 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 IGLV3-1P01715 115 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 BGLAPP02818 100 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 GLULP15104 373 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF43P17038 809 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 CSNK1A1P48729 337 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 CCL11P51671 97 aa3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SNU13P55769 128 aaKnown RBP3.68□□□□□ -1.82
UBE4A-201ENST00000252108 SLC37A1P57057 533 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms