RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 BET1O15155 118 aa8.9□□□□□ -0.99
COPB1-201ENST00000249923 SFTPDP35247 375 aa8.9□□□□□ -0.99
COPB1-201ENST00000249923 PTGFRP43088 359 aa8.9□□□□□ -0.99
COPB1-201ENST00000249923 RGS19P49795 217 aa8.9□□□□□ -0.99
COPB1-201ENST00000249923 AFF3P51826 1226 aaKnown RBP8.9□□□□□ -0.99
COPB1-201ENST00000249923 PRSS12P56730 875 aa8.9□□□□□ -0.99
COPB1-201ENST00000249923 FABP9Q0Z7S8 132 aa8.9□□□□□ -0.99
COPB1-201ENST00000249923 THEM4Q5T1C6 240 aa8.9□□□□□ -0.99
COPB1-201ENST00000249923 RASL10BQ96S79 203 aa8.9□□□□□ -0.99
COPB1-201ENST00000249923 PRRT1Q99946 306 aa8.9□□□□□ -0.99
COPB1-201ENST00000249923 PARPBPQ9NWS1 579 aa8.9□□□□□ -0.99
COPB1-201ENST00000249923 ZNF581Q9P0T4 197 aa8.9□□□□□ -0.99
COPB1-201ENST00000249923 PPP4R1LQ9P1A2 415 aa8.9□□□□□ -0.99
COPB1-201ENST00000249923 NCKAP5O14513 1909 aa8.9□□□□□ -0.99
COPB1-201ENST00000249923 A0A0D9SG52 128 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 IGHV5-10-1A0A0J9YXX1 117 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 MSGN1A6NI15 193 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 SCRG1O75711 98 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 CD63P08962 238 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 TPT1P13693 172 aaKnown RBP8.89□□□□□ -0.99
COPB1-201ENST00000249923 ADCYAP1P18509 176 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 MEF2DQ14814 521 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 PRAMEF20Q5VT98 475 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 AADACL3Q5VUY0 350 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 ZDHHC22Q8N966 263 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 ARHGAP5-AS1Q96IT6 56 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 MRGPRX4Q96LA9 322 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 OR5B2Q96R09 309 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 FBXO7Q9Y3I1 522 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 KIAA1549Q9HCM3 1950 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 IGKV1D-8A0A087WSZ0 117 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 LRP3O75074 770 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 IGLV3-1P01715 115 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 CCL1P22362 96 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 EMP2P54851 167 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 PPIAP62937 165 aaKnown RBP8.89□□□□□ -0.99
COPB1-201ENST00000249923 CDCP2Q5VXM1 449 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 ZSCAN4Q8NAM6 433 aaPredicted RBP8.89□□□□□ -0.99
COPB1-201ENST00000249923 OR5D14Q8NGL3 314 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 RTBDNQ9BSG5 229 aaPredicted RBP8.89□□□□□ -0.99
COPB1-201ENST00000249923 SLC25A32Q9H2D1 315 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 ESRP2Q9H6T0 727 aaKnown RBP8.89□□□□□ -0.99
COPB1-201ENST00000249923 MIOXQ9UGB7 285 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 MMP24Q9Y5R2 645 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 AHCTF1Q8WYP5 2266 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 MFNGO00587 321 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 QDPRP09417 244 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 RPS2P15880 293 aaKnown RBP8.89□□□□□ -0.99
COPB1-201ENST00000249923 OMGP23515 440 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 ZNF41P51814 821 aaPredicted RBP8.89□□□□□ -0.99
COPB1-201ENST00000249923 CCL7P80098 99 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 EIF2S3LQ2VIR3 472 aaKnown RBP8.89□□□□□ -0.99
COPB1-201ENST00000249923 CPEB2Q7Z5Q1 589 aaKnown RBP8.89□□□□□ -0.99
COPB1-201ENST00000249923 RABEPKQ7Z6M1 372 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 UEVLDQ8IX04 471 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 FAM24BQ8N5W8 94 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 HSD17B11Q8NBQ5 300 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 OR10H5Q8NGA6 315 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 ZNF837Q96EG3 531 aaPredicted RBP8.89□□□□□ -0.99
COPB1-201ENST00000249923 PCED1AQ9H1Q7 454 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 PIGMQ9H3S5 423 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 PROK2Q9HC23 129 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 CYTL1Q9NRR1 136 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 PISDQ9UG56 409 aa8.89□□□□□ -0.99
COPB1-201ENST00000249923 PURGQ9UJV8 347 aaKnown RBP8.89□□□□□ -0.99
COPB1-201ENST00000249923 MRPS28Q9Y2Q9 187 aaKnown RBP8.89□□□□□ -0.99
COPB1-201ENST00000249923 DIDO1Q9BTC0 2240 aaKnown RBP8.89□□□□□ -0.99
COPB1-201ENST00000249923 PMS2P1A4D2B8 440 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 H7C1Q1 480 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 EIF3GO75821 320 aaKnown RBP eCLIP8.88□□□□□ -0.99
COPB1-201ENST00000249923 DUS4LO95620 317 aaKnown RBP8.88□□□□□ -0.99
COPB1-201ENST00000249923 WDPCPO95876 746 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 HIST1H1DP16402 221 aaKnown RBP8.88□□□□□ -0.99
COPB1-201ENST00000249923 SLC6A9P48067 706 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 CX3CR1P49238 355 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 CLRN1P58418 232 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 FXYD4P59646 89 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 GABREP78334 506 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 ANKRD55Q3KP44 614 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 LPCAT3Q6P1A2 487 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 FADS6Q8N9I5 356 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 SECTM1Q8WVN6 248 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 S100A13Q99584 98 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 OCIAD1Q9NX40 245 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 ZMAT5Q9UDW3 170 aaKnown RBP8.88□□□□□ -0.99
COPB1-201ENST00000249923 SRPK3Q9UPE1 567 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 AMDHD2Q9Y303 409 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 IGHV3-15A0A0B4J1V0 119 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 A6NLC8 198 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 OR2F2O95006 317 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 TSPAN15O95858 294 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 ACTL6AO96019 429 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 CRHP06850 196 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 GP1BAP07359 652 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 RCC1P18754 421 aaPredicted RBP8.88□□□□□ -0.99
COPB1-201ENST00000249923 SNU13P55769 128 aaKnown RBP8.88□□□□□ -0.99
COPB1-201ENST00000249923 OR2F1Q13607 317 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 C4orf17Q53FE4 359 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 ACOT7LQ6ZUV0 252 aa8.88□□□□□ -0.99
COPB1-201ENST00000249923 FAM57BQ71RH2 274 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms