RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CDIPTO14735 213 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 SYT7O43581 403 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 IGHA1P01876 353 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 UBCP0CG48 685 aaKnown RBP20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 CD80P33681 288 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 PSMB10P40306 273 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 CSNK2BP67870 215 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 ELF3P78545 371 aaPredicted RBP20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 GALEQ14376 348 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 WDR38Q5JTN6 314 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 PLCXD3Q63HM9 321 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 SFRP4Q6FHJ7 346 aaPredicted RBP20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 FDX2Q6P4F2 183 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 SYS1Q8N2H4 156 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 C19orf18Q8NEA5 215 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 CYGBQ8WWM9 190 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 C10orf35Q96D05 121 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 TMPRSS13Q9BYE2 586 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 HSPE1-MOB4S4R3N1 261 aa20.34■□□□□ 0.85
SDF2L1-201ENST00000248958 IRGMA1A4Y4 181 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 SRRM5B3KS81 715 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 C3orf80F5H4A9 247 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 PITPNBP48739 271 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 GPM6AP51674 278 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 ADARB1P78563 741 aaKnown RBP20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 MRPL28Q13084 256 aaKnown RBP20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 MICBQ29980 383 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 CEP78Q5JTW2 689 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 TMEM244Q5VVB8 128 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 TMEM42Q69YG0 159 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 SCCPDHQ8NBX0 429 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 HAVCR2Q8TDQ0 301 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 RPL3LQ92901 407 aaKnown RBP20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 C12orf43Q96C57 262 aaKnown RBP20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 ALG8Q9BVK2 526 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 C7orf69Q9H7B7 122 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 METTL17Q9H7H0 456 aaPredicted RBP20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 PLEKHA1Q9HB21 404 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 AMBNQ9NP70 447 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 ERVK-18Q9QC07 812 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 CLN8Q9UBY8 286 aa20.33■□□□□ 0.85
SDF2L1-201ENST00000248958 ZNF732B4DXR9 585 aa20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 H0YAE9 185 aa20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 TNFRSF13BO14836 293 aaPredicted RBP20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 WBP4O75554 376 aaKnown RBP20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 RPSAP08865 295 aaKnown RBP20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 HTR1AP08908 422 aa20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 CCR9P51686 369 aa20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 OR12D2P58182 307 aa20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 LYPD2Q6UXB3 125 aa20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 PRSS35Q8N3Z0 413 aa20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 OR2G2Q8NGZ5 317 aa20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 ZNF671Q8TAW3 534 aa20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 FGF23Q9GZV9 251 aaPredicted RBP20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 OR51I2Q9H344 312 aa20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 FGF20Q9NP95 211 aaPredicted RBP20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 METRNQ9UJH8 293 aa20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 MYRFQ9Y2G1 1151 aa20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 INSIG2Q9Y5U4 225 aa20.32■□□□□ 0.84
SDF2L1-201ENST00000248958 J3QLW9 94 aa20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 PHF1O43189 567 aaPredicted RBP20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 ZNF19P17023 458 aa20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 EGR1P18146 543 aa20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 ODF4Q2M2E3 257 aa20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 LHFPL3Q86UP9 236 aa20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 FAM90A1Q86YD7 464 aa20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 OR52I1Q8NGK6 324 aa20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 C4orf36Q96KX1 117 aa20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 TECTBQ96PL2 329 aa20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 JAM3Q9BX67 310 aa20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 ERVK13-1Q9NX77 482 aa20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 KAAG1Q9UBP8 84 aa20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 ARHGAP32A7KAX9 2087 aa20.31■□□□□ 0.84
SDF2L1-201ENST00000248958 ERICH4A6NGS2 130 aa20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 TRAPPC2LH3BP13 241 aa20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 ADAM20O43506 726 aa20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 CLIC3O95833 236 aa20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 ISG15P05161 165 aa20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 CAPGP40121 348 aa20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 KIR3DL2P43630 455 aa20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 SLC34A1Q06495 639 aa20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 C11orf91Q3C1V1 193 aa20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 WDR25Q64LD2 544 aaPredicted RBP20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 BTNL3Q6UXE8 466 aa20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 RNF166Q96A37 237 aaPredicted RBP20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 PELI1Q96FA3 418 aa20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 MRI1Q9BV20 369 aa20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 MMP26Q9NRE1 261 aa20.3■□□□□ 0.84
SDF2L1-201ENST00000248958 ANKRD61A6NGH8 418 aa20.29■□□□□ 0.84
SDF2L1-201ENST00000248958 GATBO75879 557 aaKnown RBP20.29■□□□□ 0.84
SDF2L1-201ENST00000248958 SERPINA3P01011 423 aa20.29■□□□□ 0.84
SDF2L1-201ENST00000248958 GYPAP02724 150 aa20.29■□□□□ 0.84
SDF2L1-201ENST00000248958 CD276Q5ZPR3 534 aa20.29■□□□□ 0.84
SDF2L1-201ENST00000248958 ZNF841Q6ZN19 808 aa20.29■□□□□ 0.84
SDF2L1-201ENST00000248958 C1QL2Q7Z5L3 287 aa20.29■□□□□ 0.84
SDF2L1-201ENST00000248958 ZNF573Q86YE8 665 aa20.29■□□□□ 0.84
SDF2L1-201ENST00000248958 NANPQ8TBE9 248 aa20.29■□□□□ 0.84
SDF2L1-201ENST00000248958 RAB40AQ8WXH6 277 aa20.29■□□□□ 0.84
SDF2L1-201ENST00000248958 DNTTIP1Q9H147 329 aa20.29■□□□□ 0.84
SDF2L1-201ENST00000248958 GPR173Q9NS66 373 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms