RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 TBPP20226 339 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 HTR5AP47898 357 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 RIPPLY1Q0D2K3 151 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 GUCA2BQ16661 112 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 ANKRD55Q3KP44 614 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 MEX3BQ6ZN04 569 aaKnown RBP11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 CBLN2Q8IUK8 224 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 CARFQ8N187 725 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 WDSUB1Q8N9V3 476 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 ZSCAN4Q8NAM6 433 aaPredicted RBP11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 OR13G1Q8NGZ3 307 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 OR10C1Q96KK4 312 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 FAAP24Q9BTP7 215 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 ECH1Q13011 328 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 HLA-BQ31612 363 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 PDSS1Q5T2R2 415 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 SLC25A47Q6Q0C1 308 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 DRAM2Q6UX65 266 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 RPS19BP1Q86WX3 136 aaKnown RBP11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 SVBPQ8N300 66 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 PIGCQ92535 297 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 MRGPRFQ96AM1 343 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 RRNAD1Q96FB5 475 aaKnown RBP11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 PIK3IP1Q96FE7 263 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 ZNF442Q9H7R0 627 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 FN3KRPQ9HA64 309 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 ZNF107Q9UII5 783 aaPredicted RBP11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 SIT1Q9Y3P8 196 aa11.09□□□□□ -0.63
RAB3IP-201ENST00000247833 IGKV1-9A0A0C4DH69 117 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 CCDC163A0A0D9SF12 145 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 LRP3O75074 770 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 HPNP05981 417 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 EPHA8P29322 1005 aaPredicted RBP11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 SSR4P51571 173 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 CEBPGP53567 150 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 FAM76BQ5HYJ3 339 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 SPIN3Q5JUX0 258 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 TSPO2Q5TGU0 170 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 FAM180AQ6UWF9 173 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 GPR137CQ8N3F9 429 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 SEMA6DQ8NFY4 1073 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 ZNF837Q96EG3 531 aaPredicted RBP11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 TGIF2Q9GZN2 237 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 SLC2A8Q9NY64 477 aa11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 ZNF629Q9UEG4 869 aaPredicted RBP11.08□□□□□ -0.63
RAB3IP-201ENST00000247833 E9PLN8 166 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 K7EPK0 472 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 SGCEO43556 437 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 DIRAS3O95661 229 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 ZNF345Q14585 488 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 RPL7L1Q6DKI1 246 aaKnown RBP11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 MAML2Q8IZL2 1156 aaPredicted RBP11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 FAM71E2Q8N5Q1 922 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 IFI44Q8TCB0 444 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 NELFAQ9H3P2 528 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 GPR132Q9UNW8 380 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 MED19A0JLT2 244 aaPredicted RBP11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 AQP7P3A6NL99 342 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 HSPB6O14558 160 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 XRCC2O43543 280 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 PRKACAP17612 351 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 RCC1P18754 421 aaPredicted RBP11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 FPR2P25090 351 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 RFC3P40938 356 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 UBE2V2Q15819 145 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 EIF5AL1Q6IS14 154 aaKnown RBP11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 ZNF774Q6NX45 483 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 MOB3CQ70IA8 216 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 WBP1Q96G27 269 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 PECRQ9BY49 303 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 MED9Q9NWA0 146 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 KCNIP3Q9Y2W7 256 aa11.08□□□□□ -0.64
RAB3IP-201ENST00000247833 A0A1W2PNV4 684 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 H0YIZ8 118 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 DHRS3O75911 302 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 OR7C1O76099 320 aaPredicted RBP11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 MELTFP08582 738 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 CALCRP30988 508 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 CBX5P45973 191 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 RPS18P62269 152 aaKnown RBP11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 OR6S1Q8NH40 331 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 TAF9BQ9HBM6 251 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 CRLF2Q9HC73 371 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 SVILO95425 2214 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 ADAM10O14672 748 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 ABCD4O14678 606 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 IFNA2P01563 188 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 AKR1C3P42330 323 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 RBM39Q14498 530 aaKnown RBP11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 PHYHD1Q5SRE7 291 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 OR5L1Q8NGL2 311 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 OR14K1Q8NGZ2 314 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 C2orf50Q96LR7 162 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 PIGQQ9BRB3 760 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 DNTTIP1Q9H147 329 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.07□□□□□ -0.641e-6■■■■□ 24.6
RAB3IP-201ENST00000247833 SHANK1Q9Y566 2161 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 CXCL13O43927 109 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 P04436 131 aa11.07□□□□□ -0.64
RAB3IP-201ENST00000247833 OR5H8P0DN80 308 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms