RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 LRRC18Q8N456 261 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 ARRDC1Q8N5I2 433 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 OR14L1PQ8NHC6 308 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 STOML3Q8TAV4 291 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 C10orf35Q96D05 121 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 RAB3CQ96E17 227 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 FBXO17Q96EF6 278 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 ZNF75AQ96N20 296 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 SPRY4Q9C004 299 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 GHRLQ9UBU3 117 aa19.2■□□□□ 0.66
RNF39-201ENST00000244360 PCSK5Q92824 1860 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 MPTX1A8MV57 137 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 F5H0A9 414 aaPredicted RBP19.19■□□□□ 0.66
RNF39-201ENST00000244360 SOCS1O15524 211 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 CRHP06850 196 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 AVPR2P30518 371 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 SLC6A9P48067 706 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 TMEM50BP56557 158 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 PNLIPRP3Q17RR3 467 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 ESX1Q8N693 406 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 OR56B1Q8NGI3 324 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 CASTOR1Q8WTX7 329 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 PP6455Q8WZ26 134 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 ZNF837Q96EG3 531 aaPredicted RBP19.19■□□□□ 0.66
RNF39-201ENST00000244360 LIN37Q96GY3 246 aaPredicted RBP19.19■□□□□ 0.66
RNF39-201ENST00000244360 ADGRG7Q96K78 797 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 CHST5Q9GZS9 411 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 MBD2Q9UBB5 411 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 MRPS18CQ9Y3D5 142 aaKnown RBP19.19■□□□□ 0.66
RNF39-201ENST00000244360 RAB19A4D1S5 217 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 PMS2P1A4D2B8 440 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 ZNF716A6NP11 495 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 M0R135 149 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 TSPAN9O75954 239 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 NAT2P11245 290 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 AKR1C4P17516 323 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 PSMB6P28072 239 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 MPLP40238 635 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 ATXN7L3Q14CW9 347 aaPredicted RBP19.19■□□□□ 0.66
RNF39-201ENST00000244360 FAM89BQ8N5H3 189 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 ZNF799Q96GE5 643 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 SCGB3A2Q96PL1 93 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 TAAR9Q96RI9 348 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 GPER1Q99527 375 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 DDA1Q9BW61 102 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 STRADBQ9C0K7 418 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 BANF2Q9H503 90 aa19.19■□□□□ 0.66
RNF39-201ENST00000244360 CHMP1AQ9HD42 196 aaPredicted RBP19.19■□□□□ 0.66
RNF39-201ENST00000244360 COL6A3P12111 3177 aa19.18■□□□□ 0.66
RNF39-201ENST00000244360 TRBV6-7A0A0A0MS04 114 aa19.18■□□□□ 0.66
RNF39-201ENST00000244360 MFNGO00587 321 aa19.18■□□□□ 0.66
RNF39-201ENST00000244360 RFPL3SP0C7P2 107 aa19.18■□□□□ 0.66
RNF39-201ENST00000244360 CRYGSP22914 178 aa19.18■□□□□ 0.66
RNF39-201ENST00000244360 CARD18P57730 90 aa19.18■□□□□ 0.66
RNF39-201ENST00000244360 KISS1Q15726 138 aa19.18■□□□□ 0.66
RNF39-201ENST00000244360 ABLIM2Q6H8Q1 611 aa19.18■□□□□ 0.66
RNF39-201ENST00000244360 ELP2Q6IA86 826 aa19.18■□□□□ 0.66
RNF39-201ENST00000244360 KCTD9Q7L273 389 aa19.18■□□□□ 0.66
RNF39-201ENST00000244360 GPR137CQ8N3F9 429 aa19.18■□□□□ 0.66
RNF39-201ENST00000244360 ADAD2Q8NCV1 583 aaKnown RBP19.18■□□□□ 0.66
RNF39-201ENST00000244360 SPTSSAQ969W0 71 aa19.18■□□□□ 0.66
RNF39-201ENST00000244360 URM1Q9BTM9 101 aaKnown RBP19.18■□□□□ 0.66
RNF39-201ENST00000244360 A0A0B4J2A0 478 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 A0A1W2PP11 408 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 CEACAM18A8MTB9 384 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 PMP2P02689 132 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 CBX5P45973 191 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 TMEM128Q5BJH2 165 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 RAB11FIP2Q7L804 512 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 PNLDC1Q8NA58 520 aaKnown RBP19.17■□□□□ 0.66
RNF39-201ENST00000244360 TERB2Q8NHR7 220 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 LRRC46Q96FV0 321 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.17■□□□□ 0.66
RNF39-201ENST00000244360 DEPPQ9NTK1 212 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 P4HTMQ9NXG6 502 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 PLEK2Q9NYT0 353 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 SHPKQ9UHJ6 478 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 C5orf51A6NDU8 294 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 FOXI3A8MTJ6 420 aaPredicted RBP19.17■□□□□ 0.66
RNF39-201ENST00000244360 CRTAPO75718 401 aaPredicted RBP19.17■□□□□ 0.66
RNF39-201ENST00000244360 NTF4P34130 210 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 PTGFRP43088 359 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 NAAAQ02083 359 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 RAB35Q15286 201 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 UBE2V2Q15819 145 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 CCDC157Q569K6 752 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 BEX5Q5H9J7 111 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 OR5T2Q8NGG2 359 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 PSMF1Q92530 271 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 MARC2Q969Z3 335 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 SLC6A15Q9H2J7 730 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 PCDHGA1Q9Y5H4 931 aa19.17■□□□□ 0.66
RNF39-201ENST00000244360 EEF1E1-BLOC1S5C9J1V9 151 aa19.16■□□□□ 0.66
RNF39-201ENST00000244360 ATP6V1G2-DDX39BF2Z307 99 aa19.16■□□□□ 0.66
RNF39-201ENST00000244360 F8VVB4 439 aa19.16■□□□□ 0.66
RNF39-201ENST00000244360 F8VWA3 439 aa19.16■□□□□ 0.66
RNF39-201ENST00000244360 DBHP09172 617 aa19.16■□□□□ 0.66
RNF39-201ENST00000244360 CST2P09228 141 aa19.16■□□□□ 0.66
RNF39-201ENST00000244360 TPT1P13693 172 aaKnown RBP19.16■□□□□ 0.66
RNF39-201ENST00000244360 TMEM185AQ8NFB2 350 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms