RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CHST5Q9GZS9 411 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 LOC390937A0A1W2PQ73 354 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 P2RY14Q15391 338 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 NKAPLQ5M9Q1 402 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 SPANXN2Q5MJ10 180 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 FAM27D1Q5T7N8 215 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 NEUROG1Q92886 237 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 RAB1CQ92928 201 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 EMG1Q92979 244 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 MARS2Q96GW9 593 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 BCL7BQ9BQE9 202 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 CENPOQ9BU64 300 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 TMA7Q9Y2S6 64 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 hCG_38984A0A1B0GV85 526 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 NOTOA8MTQ0 251 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 E7EQL1 145 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 CD1AP06126 327 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 PSKH1P11801 424 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 OTX1P32242 354 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 ARFRP1Q13795 201 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 CDSNQ15517 529 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 MOGAT3Q86VF5 341 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 OR51T1Q8NGJ9 327 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 OR6M1Q8NGM8 313 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 FAM46BQ96A09 425 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 ADAT3Q96EY9 351 aaPredicted RBP9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 OR2V2Q96R30 315 aa9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 LSM2Q9Y333 95 aaKnown RBP9.55□□□□□ -0.88
TNFAIP3-201ENST00000237289 GPX5O75715 221 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZNF787Q6DD87 383 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 GLIPR1L1Q6UWM5 242 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 BATF2Q8N1L9 274 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 TREM2Q9NZC2 230 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 AKAP6Q13023 2319 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 NKX6-3A6NJ46 265 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 TMEM210A6NLX4 147 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 UBBP0CG47 229 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 DAZAP2Q15038 168 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 KISS1Q15726 138 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 SSX1Q16384 188 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 MBNL2Q5VZF2 373 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 MYPOPQ86VE0 399 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 DNAAF1Q8NEP3 725 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 ITLN1Q8WWA0 313 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 MRI1Q9BV20 369 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 ATG5Q9H1Y0 275 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 BARX1Q9HBU1 254 aaPredicted RBP9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 CELSR3Q9NYQ7 3312 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 IQCF6A8MYZ5 107 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 ATP6V1G1O75348 118 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 IGHV3-13P01766 116 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 ALDH3B2P48448 385 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 PITPNBP48739 271 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 CEACAM21Q3KPI0 293 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 ASCC1Q8N9N2 400 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 S100A16Q96FQ6 103 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 ITGB1BP2Q9UKP3 347 aa9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 FASNP49327 2511 aaKnown RBP9.54□□□□□ -0.88
TNFAIP3-201ENST00000237289 CDIPTO14735 213 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 NCR1O76036 304 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 IL1AP01583 271 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 GTF2F2P13984 249 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 GALP22466 123 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 CDKN1AP38936 164 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 TESK1Q15569 626 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 FAM209AQ5JX71 171 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 CLEC2AQ6UVW9 174 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 LRP11Q86VZ4 500 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 KCNG3Q8TAE7 436 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 SETD6Q8TBK2 473 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 LRRC29Q8WV35 223 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZNF319Q9P2F9 582 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 C17orf100A8MU93 164 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 INSL4Q14641 139 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 ADIPOQQ15848 244 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 SMIM21Q3B7S5 101 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZNF611Q8N823 705 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 NEU4Q8WWR8 484 aaPredicted RBP9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 DIRAS2Q96HU8 199 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 OR7C1O76099 320 aaPredicted RBP9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 ZNF182P17025 639 aaPredicted RBP9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 PRKACAP17612 351 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 GABRR1P24046 479 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 MICBQ29980 383 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 PRAMEF6Q5VXH4 476 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 SAMD12Q8N8I0 201 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 RNF7Q9UBF6 113 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 DCHS1Q96JQ0 3298 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 SPRY1O43609 319 aaPredicted RBP9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 IKZF1Q13422 519 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 Q8IYB0 196 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 ACOT12Q8WYK0 555 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 TMEM59Q9BXS4 323 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 DLL4Q9NR61 685 aa9.53□□□□□ -0.88
TNFAIP3-201ENST00000237289 KITLGP21583 273 aa9.52□□□□□ -0.88
TNFAIP3-201ENST00000237289 CLDN12P56749 244 aa9.52□□□□□ -0.88
TNFAIP3-201ENST00000237289 NLRC3Q7RTR2 1065 aa9.52□□□□□ -0.88
TNFAIP3-201ENST00000237289 NAA50Q9GZZ1 169 aaKnown RBP9.52□□□□□ -0.88
TNFAIP3-201ENST00000237289 CLDN25C9JDP6 229 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 ANGPTL7O43827 346 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms