RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 EIF5AL1Q6IS14 154 aaKnown RBP8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 CFAP161Q6P656 301 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 IL34Q6ZMJ4 242 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 LANCL3Q6ZV70 420 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 KDF1Q8NAX2 398 aaPredicted RBP8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 ADAD2Q8NCV1 583 aaKnown RBP8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR52N4Q8NGI2 321 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR56B1Q8NGI3 324 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 THAP3Q8WTV1 239 aaPredicted RBP8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 EMC6Q9BV81 110 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 LSM5Q9Y4Y9 91 aaKnown RBP8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 R4GMQ9 66 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 URB1O60287 2271 aaKnown RBP8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 A0A0A6YYH2 397 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 A0A1W2PPC4 97 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 A6NJ64 397 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 SHISA8B8ZZ34 492 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZNF587BE7ETH6 402 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 PROB1E7EW31 1015 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 MS4A18H0YCH9 400 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 CD74P04233 296 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 GNB3P16520 340 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 ARRB1P49407 418 aaPredicted RBP8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 BLKP51451 505 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 SSBP1Q04837 148 aaKnown RBP8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 MS4A18Q3C1V0 323 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 NUP54Q7Z3B4 507 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 TRAPPC6BQ86SZ2 158 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 LYPD6Q86Y78 171 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 SLC26A10Q8NG04 563 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR2I1PQ8NGU4 316 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 WWTR1Q9GZV5 400 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 KCNIP3Q9Y2W7 256 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 CACNA1DQ01668 2161 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 A8MVM7 634 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 STK17BO94768 372 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 MT-ATP6P00846 226 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 MYF5P13349 255 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 ANOS1P23352 680 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 CD96P40200 585 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 POLR2HP52434 150 aaKnown RBP8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 ELOCQ15369 112 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZNF260Q3ZCT1 412 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 PTCRAQ6ISU1 281 aaPredicted RBP8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZSCAN4Q8NAM6 433 aaPredicted RBP8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 HSD17B11Q8NBQ5 300 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 APCDD1LQ8NCL9 501 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 BSCL2Q96G97 398 aaPredicted RBP8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 FAM212BQ9NTI7 297 aaPredicted RBP8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR5AC2Q9NZP5 309 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 WIF1Q9Y5W5 379 aa8.33□□□□□ -1.08
HLA-DOA-201ENST00000229829 H3BMH7 237 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 SLC33A1O00400 549 aaPredicted RBP8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 KNG1P01042 644 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 GLI4P10075 376 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 CD37P11049 281 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZNF823P16415 610 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 FSTP19883 344 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 SERPINA2P20848 420 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZBTB25P24278 435 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 HRH1P35367 487 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 GNG10P50151 68 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 NPY4RP50391 375 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 KHDC3LQ587J8 217 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 MARCH1Q8TCQ1 289 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 AQP3Q92482 292 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 ADAT3Q96EY9 351 aaPredicted RBP8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 SNX22Q96L94 193 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 NELFAQ9H3P2 528 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 FTCDNL1E5RQL4 147 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 ADAM10O14672 748 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 ATXN7O15265 892 aaPredicted RBP8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 AHSA1O95433 338 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 OPN1LWP04000 364 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 HEXAP06865 529 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 HIST1H1BP16401 226 aaKnown RBP8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 TAGLN2P37802 199 aaKnown RBP8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 CDX1P47902 265 aaPredicted RBP8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 SLC26A5P58743 744 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 PKIAP61925 76 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 RHEBQ15382 184 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 GUK1Q16774 197 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 SOHLH1Q5JUK2 328 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZNF610Q8N9Z0 462 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 THRSPQ92748 146 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 MR1Q95460 341 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 NUDT22Q9BRQ3 303 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 PRDM13Q9H4Q3 707 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 VDAC3Q9Y277 283 aa8.32□□□□□ -1.08
HLA-DOA-201ENST00000229829 C9orf170A2RU37 121 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 TLCD2A6NGC4 264 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 EREGO14944 169 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZNF217O75362 1048 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 TRGC2P03986 189 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 HCKP08631 526 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 ASCL1P50553 236 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 CCR5P51681 352 aa8.31□□□□□ -1.08
HLA-DOA-201ENST00000229829 POU3F1Q03052 451 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms