RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 TIMD4Q96H15 378 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 HIST1H2AAQ96QV6 131 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 RTL8AQ9BWD3 113 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 TMEM165Q9HC07 324 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 RNF7Q9UBF6 113 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 ABCA2Q9BZC7 2435 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 TLN2Q9Y4G6 2542 aa12.09□□□□□ -0.47
SUPT4H1-201ENST00000225504 ISPDA4D126 451 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 DHRS7CA6NNS2 312 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 FAM157AC9JC47 383 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 CDIPTO14735 213 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 DENRO43583 198 aaKnown RBP12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 CCDC159P0C7I6 412 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 EGR1P18146 543 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 BTG1P62324 171 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 RPL22L1Q6P5R6 122 aaKnown RBP12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 WDR82Q6UXN9 313 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 PEG10Q86TG7 708 aaKnown RBP12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 SCCPDHQ8NBX0 429 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 OR5A2Q8NGI9 324 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 OR11L1Q8NGX0 322 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 RPS4Y2Q8TD47 263 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 MYDGFQ969H8 173 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 MSI2Q96DH6 328 aaKnown RBP12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 SEH1LQ96EE3 360 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 TLNRD1Q9H1K6 362 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 OR51I2Q9H344 312 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 HHLA2Q9UM44 414 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 TPRKBQ9Y3C4 175 aa12.08□□□□□ -0.47
SUPT4H1-201ENST00000225504 IFNL4K9M1U5 179 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 LHBP01229 141 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 CD80P33681 288 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 CDH15P55291 814 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 MZT1Q08AG7 82 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 MRPL28Q13084 256 aaKnown RBP12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 MED21Q13503 144 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 IRF3Q14653 427 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 CDK5R1Q15078 307 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 CCDC58Q4VC31 144 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 SFRP4Q6FHJ7 346 aaPredicted RBP12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 GCSAMQ8N6F7 178 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 TRMT10AQ8TBZ6 339 aaKnown RBP12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 NPRL2Q8WTW4 380 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 OR5M11Q96RB7 305 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 CDCA4Q9BXL8 241 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 ABCB9Q9NP78 766 aa12.08□□□□□ -0.48
SUPT4H1-201ENST00000225504 MTORP42345 2549 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 PPIAL4EA0A075B759 164 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 IGKV1-9A0A0C4DH69 117 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 hCG_1807616A0A1W2PRN6 198 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 ANKRD61A6NGH8 418 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 LRRC30A6NM36 301 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 TMEM212A6NML5 194 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 PPIAL4DF5H284 164 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 RHBDL1O75783 438 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 MT-ND2P03891 347 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 PPIAL4FP0DN26 164 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 IRF2P14316 349 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 GNG3P63215 75 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 RNLSQ5VYX0 342 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 CYB5R2Q6BCY4 276 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 DMKNQ6E0U4 476 aaPredicted RBP12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 LYPD2Q6UXB3 125 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 RNF144BQ7Z419 303 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 ANGPTL5Q86XS5 388 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 CCDC54Q8NEL0 328 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 OR13C3Q8NGS6 347 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 LRRC29Q8WV35 223 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 GHSRQ92847 366 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 HPS1Q92902 700 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 C1orf159Q96HA4 380 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 GAL3ST1Q99999 423 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 TMEM246Q9BRR3 403 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 ZNF665Q9H7R5 613 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 PLEKHA1Q9HB21 404 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 PPIAL4AQ9Y536 164 aa12.07□□□□□ -0.48
SUPT4H1-201ENST00000225504 IGKV1-27A0A075B6S5 117 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 IGHV3OR15-7A0A075B7D8 119 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 PNMA8CA0A1B0GUJ8 204 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 FAM230AA0A1W2PPH8 454 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 PQLC2LA1A4F0 135 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 TMEM210A6NLX4 147 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 CD5LO43866 347 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 IGHV2-5P01817 119 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 MDH2P40926 338 aaKnown RBP12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 MAP2K4P45985 399 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 WNT4P56705 351 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 GMFBP60983 142 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 SEC61A1P61619 476 aaKnown RBP12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 C1orf87Q8N0U7 546 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 OR13C5Q8NGS8 318 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 COMMD4Q9H0A8 199 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 LPAR2Q9HBW0 351 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 YAE1D1Q9NRH1 226 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 ERGIC3Q9Y282 383 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 LSM2Q9Y333 95 aaKnown RBP12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 ARHGAP32A7KAX9 2087 aa12.06□□□□□ -0.48
SUPT4H1-201ENST00000225504 MALRD1Q5VYJ5 2156 aa12.05□□□□□ -0.48
SUPT4H1-201ENST00000225504 OR5B21A6NL26 309 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms