RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 LALBAP00709 142 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 FAM122CQ6P4D5 195 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 SFTPA1Q8IWL2 248 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 C2orf50Q96LR7 162 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 H7BYZ3 331 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 NME2P1O60361 137 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 RAB7AP51149 207 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 KCNJ3P48549 501 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 NHLRC1Q6VVB1 395 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 HIST2H3AQ71DI3 136 aa16.92■□□□□ 0.3
SMPD3-201ENST00000219334 SEC14L6B5MCN3 397 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 ADAM20O43506 726 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 RBP4P02753 201 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 OR4E1P0C645 316 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 ZXDAP98168 799 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 IGFBP7Q16270 282 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 DEGS2Q6QHC5 323 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 BTNL8Q6UX41 500 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 ZNF683Q8IZ20 524 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 C12orf10Q9HB07 376 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 EVX1P49640 407 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 FAAP20Q6NZ36 180 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 FAM122BQ7Z309 247 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 RFESDQ8TAC1 157 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 DPF1Q92782 380 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 ZNF768Q9H5H4 540 aaKnown RBP16.91■□□□□ 0.3
SMPD3-201ENST00000219334 KPTNQ9Y664 436 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 EPXP11678 715 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 MAGEB1P43366 347 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 CFHR5Q9BXR6 569 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 TPRP12270 2363 aaKnown RBP16.91■□□□□ 0.3
SMPD3-201ENST00000219334 SMIM17P0DL12 118 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 AKR1C3P42330 323 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 KISS1Q15726 138 aa16.91■□□□□ 0.3
SMPD3-201ENST00000219334 SULT1A3P0DMM9 295 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 SULT1A4P0DMN0 295 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 S100A4P26447 101 aaKnown RBP16.9■□□□□ 0.3
SMPD3-201ENST00000219334 CEACAM6P40199 344 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 PLA1AQ53H76 456 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 TMEM123Q8N131 208 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 CXXC4Q9H2H0 198 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 KRASP01116 189 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 ZNF90Q03938 601 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 ZNF141Q15928 474 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 RPL7L1Q6DKI1 246 aaKnown RBP16.9■□□□□ 0.3
SMPD3-201ENST00000219334 OR5H6Q8NGV6 325 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 UBTD1Q9HAC8 227 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 C3orf80F5H4A9 247 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 UBALD1Q8TB05 177 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 OIT3Q8WWZ8 545 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 OR2M5A3KFT3 312 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 SEMG1P04279 462 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 HOXB3P14651 431 aaPredicted RBP16.9■□□□□ 0.3
SMPD3-201ENST00000219334 KIR2DL1P43626 348 aaPredicted RBP16.9■□□□□ 0.3
SMPD3-201ENST00000219334 HAGHQ16775 308 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 LYG2Q86SG7 212 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 CALHM3Q86XJ0 350 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 PIGMQ9H3S5 423 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 CYSLTR2Q9NS75 346 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 TRAV38-1A0A0B4J264 116 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 IGHV5-10-1A0A0J9YXX1 117 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 OR6C68A6NDL8 312 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 TUBAL3A6NHL2 446 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 LRRC3CA6NJW4 275 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 MDH2P40926 338 aaKnown RBP16.9■□□□□ 0.3
SMPD3-201ENST00000219334 TMEM65Q6PI78 240 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 ZFP62Q8NB50 900 aaPredicted RBP16.9■□□□□ 0.3
SMPD3-201ENST00000219334 OR4Q3Q8NH05 313 aa16.9■□□□□ 0.3
SMPD3-201ENST00000219334 MAGEA5P43359 124 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 ZNF425Q6IV72 752 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 OR2W3Q7Z3T1 314 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 ARRDC1Q8N5I2 433 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 OR52N4Q8NGI2 321 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 C4orf45Q96LM5 186 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 DERL3Q96Q80 235 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 CHRDL1Q9BU40 450 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 THYN1Q9P016 225 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 TNRC6CQ9HCJ0 1690 aaKnown RBP16.89■□□□□ 0.29
SMPD3-201ENST00000219334 PPP5D1E7EU14 171 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 PDGFBP01127 241 aaPredicted RBP16.89■□□□□ 0.29
SMPD3-201ENST00000219334 RRASP10301 218 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 HOXC8P31273 242 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 AAMDCQ9H7C9 122 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 CBR1P16152 277 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 AVPR2P30518 371 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 OR3A4PP47883 348 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 GPNMBQ14956 572 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 SH2D5Q6ZV89 423 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 ASB5Q8WWX0 329 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 CACNA1CQ13936 2221 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 ZNF727A8MUV8 499 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 DEFB108AA8MXU0 73 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 FGF7P21781 194 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 ENDOGQ14249 297 aaKnown RBP16.89■□□□□ 0.29
SMPD3-201ENST00000219334 ZNF787Q6DD87 383 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 GRAMD2BQ96HH9 432 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 ADGRG7Q96K78 797 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 PLEKHB1Q9UF11 243 aaPredicted RBP16.89■□□□□ 0.29
SMPD3-201ENST00000219334 PSG11Q9UQ72 335 aa16.89■□□□□ 0.29
SMPD3-201ENST00000219334 URGCP-MRPS24S4R325 110 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms