RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 GPR107Q5VW38 600 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 WDR86Q86TI4 376 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 MEGF10Q96KG7 1140 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 LOC100289279A0A1B0GTE1 492 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 ZNF732B4DXR9 585 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 ARL6IP5O75915 188 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 MAS1P04201 325 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 ERCC1P07992 297 aaPredicted RBP23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 TIMM50Q3ZCQ8 353 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 PRAMEF6Q5VXH4 476 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 ZNF529Q6P280 563 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 OR5A2Q8NGI9 324 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 PHYHIPQ92561 330 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 SPACA5Q96QH8 159 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 NAA50Q9GZZ1 169 aaKnown RBP23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 RNF167Q9H6Y7 350 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 SAP30LQ9HAJ7 183 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 TCF7L1Q9HCS4 588 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 C14orf119Q9NWQ9 140 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 IL19Q9UHD0 177 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 APCP25054 2843 aa23.11■■□□□ 1.29
CHMP4B-201ENST00000217402 NDUFS7O75251 213 aa23.1■■□□□ 1.29
CHMP4B-201ENST00000217402 GRPP07492 148 aa23.1■■□□□ 1.29
CHMP4B-201ENST00000217402 CD55P08174 381 aa23.1■■□□□ 1.29
CHMP4B-201ENST00000217402 HCKP08631 526 aa23.1■■□□□ 1.29
CHMP4B-201ENST00000217402 CD200P41217 278 aa23.1■■□□□ 1.29
CHMP4B-201ENST00000217402 SRP9P49458 86 aaKnown RBP23.1■■□□□ 1.29
CHMP4B-201ENST00000217402 LSM3P62310 102 aaKnown RBP23.1■■□□□ 1.29
CHMP4B-201ENST00000217402 LURAP1Q96LR2 239 aa23.1■■□□□ 1.29
CHMP4B-201ENST00000217402 CENPOQ9BU64 300 aa23.1■■□□□ 1.29
CHMP4B-201ENST00000217402 EGLN1Q9GZT9 426 aa23.1■■□□□ 1.29
CHMP4B-201ENST00000217402 FOXJ3Q9UPW0 622 aa23.1■■□□□ 1.29
CHMP4B-201ENST00000217402 POLQO75417 2590 aa23.1■■□□□ 1.29
CHMP4B-201ENST00000217402 OR5B21A6NL26 309 aa23.09■■□□□ 1.29
CHMP4B-201ENST00000217402 LY6HO94772 140 aa23.09■■□□□ 1.29
CHMP4B-201ENST00000217402 HPXP02790 462 aa23.09■■□□□ 1.29
CHMP4B-201ENST00000217402 SRMP19623 302 aa23.09■■□□□ 1.29
CHMP4B-201ENST00000217402 FGF9P31371 208 aaPredicted RBP23.09■■□□□ 1.29
CHMP4B-201ENST00000217402 GNG3P63215 75 aa23.09■■□□□ 1.29
CHMP4B-201ENST00000217402 MZT1Q08AG7 82 aa23.09■■□□□ 1.29
CHMP4B-201ENST00000217402 SPSB1Q96BD6 273 aa23.09■■□□□ 1.29
CHMP4B-201ENST00000217402 BORCS8Q96FH0 119 aa23.09■■□□□ 1.29
CHMP4B-201ENST00000217402 PQLC2LA1A4F0 135 aa23.08■■□□□ 1.29
CHMP4B-201ENST00000217402 PRKACBP22694 351 aa23.08■■□□□ 1.29
CHMP4B-201ENST00000217402 HNRNPA0Q13151 305 aaKnown RBP23.08■■□□□ 1.29
CHMP4B-201ENST00000217402 TMEM138Q9NPI0 162 aa23.08■■□□□ 1.29
CHMP4B-201ENST00000217402 UFSP2Q9NUQ7 469 aa23.08■■□□□ 1.29
CHMP4B-201ENST00000217402 GSTK1Q9Y2Q3 226 aa23.08■■□□□ 1.29
CHMP4B-201ENST00000217402 USF3Q68DE3 2245 aa23.08■■□□□ 1.29
CHMP4B-201ENST00000217402 BDKRB2P30411 391 aa23.08■■□□□ 1.28
CHMP4B-201ENST00000217402 FUT6P51993 359 aa23.08■■□□□ 1.28
CHMP4B-201ENST00000217402 ZNF154Q13106 437 aa23.08■■□□□ 1.28
CHMP4B-201ENST00000217402 BLMHQ13867 455 aa23.08■■□□□ 1.28
CHMP4B-201ENST00000217402 TESK1Q15569 626 aa23.08■■□□□ 1.28
CHMP4B-201ENST00000217402 MPPED2Q15777 294 aa23.08■■□□□ 1.28
CHMP4B-201ENST00000217402 RNF144BQ7Z419 303 aa23.08■■□□□ 1.28
CHMP4B-201ENST00000217402 OR52N4Q8NGI2 321 aa23.08■■□□□ 1.28
CHMP4B-201ENST00000217402 NKX3-1Q99801 234 aaPredicted RBP23.08■■□□□ 1.28
CHMP4B-201ENST00000217402 SLITRK2Q9H156 845 aa23.08■■□□□ 1.28
CHMP4B-201ENST00000217402 TREM2Q9NZC2 230 aa23.08■■□□□ 1.28
CHMP4B-201ENST00000217402 EDARQ9UNE0 448 aa23.08■■□□□ 1.28
CHMP4B-201ENST00000217402 IGKV1-27A0A075B6S5 117 aa23.07■■□□□ 1.28
CHMP4B-201ENST00000217402 MAGEB3O15480 346 aa23.07■■□□□ 1.28
CHMP4B-201ENST00000217402 MYL9P24844 172 aa23.07■■□□□ 1.28
CHMP4B-201ENST00000217402 RBMXP38159 391 aaKnown RBP23.07■■□□□ 1.28
CHMP4B-201ENST00000217402 DDI2Q5TDH0 399 aa23.07■■□□□ 1.28
CHMP4B-201ENST00000217402 SLC16A12Q6ZSM3 486 aa23.07■■□□□ 1.28
CHMP4B-201ENST00000217402 CLVS1Q8IUQ0 354 aaPredicted RBP23.07■■□□□ 1.28
CHMP4B-201ENST00000217402 RFT1Q96AA3 541 aa23.07■■□□□ 1.28
CHMP4B-201ENST00000217402 SHISA3A0PJX4 238 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 A6NLC8 198 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 TMEM210A6NLX4 147 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 CDC14BO60729 498 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 ALX3O95076 343 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 TNFRSF1AP19438 455 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 DNASE1P24855 282 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 TGFBR1P36897 503 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 RBP2P50120 134 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 MTCP1P56278 107 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 LHFPL2Q6ZUX7 228 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 LRRTM1Q86UE6 522 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 MOGAT3Q86VF5 341 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 ANKRD13BQ86YJ7 626 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 CELF2-AS1Q8N7Q2 184 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 DNAAF1Q8NEP3 725 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 NEU4Q8WWR8 484 aaPredicted RBP23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 KCTD7Q96MP8 289 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 NEK6Q9HC98 313 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 SNTG1Q9NSN8 517 aa23.06■■□□□ 1.28
CHMP4B-201ENST00000217402 PLATP00750 562 aa23.05■■□□□ 1.28
CHMP4B-201ENST00000217402 ADRA2CP18825 462 aa23.05■■□□□ 1.28
CHMP4B-201ENST00000217402 HAAOP46952 286 aa23.05■■□□□ 1.28
CHMP4B-201ENST00000217402 GDPGP1Q6ZNW5 385 aa23.05■■□□□ 1.28
CHMP4B-201ENST00000217402 ANGPTL5Q86XS5 388 aa23.05■■□□□ 1.28
CHMP4B-201ENST00000217402 PERPQ96FX8 193 aa23.05■■□□□ 1.28
CHMP4B-201ENST00000217402 ASH1LQ9NR48 2969 aaKnown RBP23.05■■□□□ 1.28
CHMP4B-201ENST00000217402 LRP5LA4QPB2 252 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 IGHV4-39P01824 125 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 ATP1B3P54709 279 aa23.04■■□□□ 1.28
CHMP4B-201ENST00000217402 HAGHLQ6PII5 290 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms