RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 PLPP3O14495 311 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 TOX4O94842 621 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 SMIM18P0DKX4 95 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 ZNF626Q68DY1 528 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 WDSUB1Q8N9V3 476 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 AKR7A2O43488 359 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 CEACAM3P40198 252 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 FOXB2Q5VYV0 432 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 KDM4DQ6B0I6 523 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 GALMQ96C23 342 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 TMPRSS13Q9BYE2 586 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 A8MXE2 369 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 TPT1P13693 172 aaKnown RBP12.2□□□□□ -0.46
SIX4-201ENST00000216513 SKP2Q13309 424 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 ACTBL2Q562R1 376 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 SPICQ8N5J4 248 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 RAB40AQ8WXH6 277 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 VSTM2LQ96N03 204 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 MSL2Q9HCI7 577 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 RNF115Q9Y4L5 304 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 AGAP14A8MT82 685 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 MDP1Q86V88 176 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 DRAXINQ8NBI3 349 aaPredicted RBP12.2□□□□□ -0.46
SIX4-201ENST00000216513 NEU3Q9UQ49 428 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 TMEM235A6NFC5 223 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 FABP1P07148 127 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 CTSBP07858 339 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 BRS3P32247 399 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 LYG1Q8N1E2 194 aa12.2□□□□□ -0.46
SIX4-201ENST00000216513 AMMECR1Q9Y4X0 333 aaPredicted RBP12.2□□□□□ -0.46
SIX4-201ENST00000216513 MYO16Q9Y6X6 1858 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 IGHV3OR15-7A0A075B7D8 119 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 GPX5O75715 221 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 CHATP28329 748 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 EGR3Q06889 387 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 PLAC9Q5JTB6 97 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 CATSPERDQ86XM0 798 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 NUDCD2Q8WVJ2 157 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 BSCL2Q96G97 398 aaPredicted RBP12.19□□□□□ -0.46
SIX4-201ENST00000216513 GAL3ST2Q9H3Q3 398 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 ZFP92A6NM28 416 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 SNRPGP62308 76 aaKnown RBP12.19□□□□□ -0.46
SIX4-201ENST00000216513 WDR88Q6ZMY6 472 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 OSR2Q8N2R0 312 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 OR52I2Q8NH67 350 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 MOB3AQ96BX8 217 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 DAZAP1Q96EP5 407 aaKnown RBP12.19□□□□□ -0.46
SIX4-201ENST00000216513 TCF20Q9UGU0 1960 aaKnown RBP12.19□□□□□ -0.46
SIX4-201ENST00000216513 hADV38S2A0JD32 116 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 CYC1P08574 325 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 SPNP16150 400 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 PSG6Q00889 435 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 PTOV1Q86YD1 416 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 RBMXL1Q96E39 390 aaKnown RBP12.19□□□□□ -0.46
SIX4-201ENST00000216513 TMEM30CPA0ZSE6 113 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 DLX5P56178 289 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 DRAM2Q6UX65 266 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 UBE3DQ7Z6J8 389 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 ZNF416Q9BWM5 594 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 C1QCP02747 245 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 OR4A8P0C604 315 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 IAPPP10997 89 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 FUT7Q11130 342 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 RHOXF1Q8NHV9 184 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 SLC35E1Q96K37 410 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 KCNK17Q96T54 332 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 SF3B5Q9BWJ5 86 aaKnown RBP12.19□□□□□ -0.46
SIX4-201ENST00000216513 UNKLQ9H9P5 680 aaKnown RBP12.19□□□□□ -0.46
SIX4-201ENST00000216513 GPR35Q9HC97 309 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 PILRAQ9UKJ1 303 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 DTX4Q9Y2E6 619 aa12.19□□□□□ -0.46
SIX4-201ENST00000216513 K7EPK0 472 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 ZNF141Q15928 474 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 SPINK9Q5DT21 86 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 STEAP1BQ6NZ63 245 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 FAM71E2Q8N5Q1 922 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 SLC25A40Q8TBP6 338 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 ABCA7Q8IZY2 2146 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 IGHV3-43A0A0B4J1X8 118 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 PDGFAP04085 211 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 IGHV3-43DP0DP04 118 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 ATF1P18846 271 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 SLC25A35Q3KQZ1 300 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 ATPAF1Q5TC12 328 aaPredicted RBP12.18□□□□□ -0.46
SIX4-201ENST00000216513 PPP1R32Q7Z5V6 425 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 TAS2R5Q9NYW4 299 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 DIMT1Q9UNQ2 313 aaKnown RBP12.18□□□□□ -0.46
SIX4-201ENST00000216513 FBXO7Q9Y3I1 522 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 LRP12Q9Y561 859 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 LIPT2A6NK58 231 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 HSBP1L1C9JCN9 74 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 MPZL1O95297 269 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 TBR1Q16650 682 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 Q56UQ5 140 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 ARHGDIGQ99819 225 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 SAMD10Q9BYL1 202 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 SPTA1P02549 2419 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 ALOX5APP20292 161 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 FABP5Q01469 135 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 INO80CQ6PI98 192 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms