RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 PVALBP20472 110 aaPredicted RBP11.53□□□□□ -0.56
CTNS-201ENST00000046640 FOLR3P41439 243 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 QRFPP83859 136 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 H3F3CQ6NXT2 135 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 TMEM105Q8N8V8 129 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 SLC25A43Q8WUT9 341 aaPredicted RBP11.53□□□□□ -0.56
CTNS-201ENST00000046640 C12orf57Q99622 126 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 PARP12Q9H0J9 701 aaKnown RBP11.53□□□□□ -0.56
CTNS-201ENST00000046640 SLCO5A1Q9H2Y9 848 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 PIGMQ9H3S5 423 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 NXT1Q9UKK6 140 aaKnown RBP11.53□□□□□ -0.56
CTNS-201ENST00000046640 KLF2Q9Y5W3 355 aaPredicted RBP11.53□□□□□ -0.56
CTNS-201ENST00000046640 IGKV1-9A0A0C4DH69 117 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 LINC01387J3KSC0 135 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 SSX5O60225 188 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 ONECUT2O95948 504 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 TCN2P20062 427 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 S100A10P60903 97 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 PLAC9Q5JTB6 97 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 WDR5BQ86VZ2 330 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 CCDC36Q8IYA8 594 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 METTL8Q9H825 291 aaKnown RBP11.53□□□□□ -0.56
CTNS-201ENST00000046640 PURGQ9UJV8 347 aaKnown RBP11.53□□□□□ -0.56
CTNS-201ENST00000046640 H0YIZ8 118 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 NTN3O00634 580 aaPredicted RBP11.53□□□□□ -0.56
CTNS-201ENST00000046640 ZFP36L1Q07352 338 aaKnown RBP11.53□□□□□ -0.56
CTNS-201ENST00000046640 ZNF345Q14585 488 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 PABPC1L2AQ5JQF8 200 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 ZNF585AQ6P3V2 769 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 ZSCAN4Q8NAM6 433 aaPredicted RBP11.53□□□□□ -0.56
CTNS-201ENST00000046640 OR14L1PQ8NHC6 308 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 PIGTQ969N2 578 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 LYZL4Q96KX0 146 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 ZNF700Q9H0M5 742 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 PLEK2Q9NYT0 353 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 OR5AC2Q9NZP5 309 aa11.53□□□□□ -0.56
CTNS-201ENST00000046640 BDP1A6H8Y1 2624 aa11.52□□□□□ -0.56
CTNS-201ENST00000046640 TECTAO75443 2155 aa11.52□□□□□ -0.56
CTNS-201ENST00000046640 IGHV3-9P01782 118 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 CRHP06850 196 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 MELTFP08582 738 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 HOXB5P09067 269 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 NTF4P34130 210 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 AKR1C3P42330 323 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 NPBWR1P48145 328 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 EXT1Q16394 746 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 HIST3H3Q16695 136 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 MICBQ29980 383 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 C1orf210Q8IVY1 113 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 OR51F2Q8NH61 342 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 OR2AE1Q8NHA4 323 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 RHBDD1Q8TEB9 315 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 PIK3IP1Q96FE7 263 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 ANGPTL4Q9BY76 406 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 LPAR5Q9H1C0 372 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 ACKR4Q9NPB9 350 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 RAD51DO75771 328 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 BPNT1O95861 308 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 CD37P11049 281 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 TDGF1P13385 188 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 MSR1P21757 451 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 ADH6P28332 368 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 ID4P47928 161 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 DSCR4P56555 118 aaPredicted RBP11.52□□□□□ -0.57
CTNS-201ENST00000046640 H3F3AP84243 136 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 SCRN3Q0VDG4 424 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 Q0VFX4 171 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 ARFRP1Q13795 201 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 LPCAT3Q6P1A2 487 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 OR9K2Q8NGE7 335 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 ARHGAP5-AS1Q96IT6 56 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 RNF126Q9BV68 326 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 ULBP2Q9BZM5 246 aa11.52□□□□□ -0.57
CTNS-201ENST00000046640 ZNF629Q9UEG4 869 aaPredicted RBP11.52□□□□□ -0.57
CTNS-201ENST00000046640 CCDC163A0A0D9SF12 145 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 STMND1H3BQB6 276 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 KNG1P01042 644 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 SFTPBP07988 381 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 SERPINA2P20848 420 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 ENDOGQ14249 297 aaKnown RBP11.51□□□□□ -0.57
CTNS-201ENST00000046640 SVBPQ8N300 66 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 RAB3CQ96E17 227 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 ALKBH3Q96Q83 286 aaPredicted RBP11.51□□□□□ -0.57
CTNS-201ENST00000046640 CMSS1Q9BQ75 279 aaKnown RBP11.51□□□□□ -0.57
CTNS-201ENST00000046640 UQCC2Q9BRT2 126 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 LOC400499M0QZD8 3231 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 CDC14BO60729 498 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 FBXO24O75426 580 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 CER1O95813 267 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 CD63P08962 238 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 TPT1P13693 172 aaKnown RBP11.51□□□□□ -0.57
CTNS-201ENST00000046640 RAB6AP20340 208 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 TMEM50BP56557 158 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 RBM39Q14498 530 aaKnown RBP11.51□□□□□ -0.57
CTNS-201ENST00000046640 RSPO1Q2MKA7 263 aaPredicted RBP11.51□□□□□ -0.57
CTNS-201ENST00000046640 WIPI1Q5MNZ9 446 aaPredicted RBP11.51□□□□□ -0.57
CTNS-201ENST00000046640 BAP18Q8IXM2 172 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 ADPRHL1Q8NDY3 354 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 FBXO17Q96EF6 278 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 TMEM59Q9BXS4 323 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms