RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Syt9Q9R0N9 491 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Mettl11bB2RXM4 283 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Irf1P15314 329 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Rpl27P61358 136 aaKnown RBP14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Stx4P70452 298 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Prmt8Q6PAK3 394 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Vmn1r189Q8K3N3 312 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 QprtQ91X91 299 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Aaed1Q9D1A0 226 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Vmn1r40Q9EQ46 310 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Hebp2Q9WU63 205 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 PthQ9Z0L6 115 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 H2afb3S4R1G7 115 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Pax4P32115 349 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Gng8P63078 70 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Nxph1Q61200 271 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 AtraidQ6PGD0 223 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Inca1Q6PKN7 231 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 CenpoQ8K015 298 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Tmem123Q91Z22 195 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Rpl14Q9CR57 217 aaKnown RBP14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Rgs19Q9CX84 216 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Lysmd1Q9D0E3 226 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 Prss22Q9ER10 306 aa14.66□□□□□ -0.06
Shh-201ENSMUST00000002708 CntrlA2AL36 2334 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Gm17677B3GLJ5 116 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Psmb1O09061 240 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr13P34984 310 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Hmga2P52927 108 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 ActbP60710 375 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Actg1P63260 375 aaKnown RBP14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 AdmP97297 184 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Smn1P97801 288 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Ces2fQ08ED5 561 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Gpr160Q3U3F9 336 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Guk1Q64520 198 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr527Q7TRT9 305 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Pias2Q8C5D8 621 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Mfsd4b1Q8VCV9 425 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Pcdhga3Q91XY5 928 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Atg5Q99J83 275 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Mid1ip1Q9CQ20 182 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 PipoxQ9D826 390 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Slc2a1P17809 492 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Dcaf7P61963 342 aaKnown RBP14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Gm10644Q3TZG3 87 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Rspo4Q8BJ73 228 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 ArsjQ8BM89 598 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Ly6g6eQ8K1T6 166 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 0610009B22RikQ8R3W2 140 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Zfp959Q91VM8 539 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 CsprsQ99388 208 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Tspan32Q9JHH2 256 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Arl6ip1Q9JKW0 203 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Cml5Q9QXS8 227 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Anxa10Q9QZ10 324 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Polg2Q9QZM2 459 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Clcf1Q9QZM3 225 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 AtmQ62388 3066 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Notch4P31695 1964 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Gm10358A0A1D5RLD8 333 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Scgb1b30A2BH64 92 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Cypt3B1AY64 174 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Rab11fip2G3XA57 512 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 GapdhP16858 333 aaKnown RBP14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Ptx3P48759 381 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Thsd4Q3UTY6 1018 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr259Q7TS20 312 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Pcyt1bQ811Q9 369 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Fbxo46Q8BG80 603 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Cbln2Q8BGU2 224 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Gemin8Q8BHE1 238 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Znf768Q8R0T2 568 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr836Q8VFJ3 317 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Nt5dc2Q91X76 390 aaKnown RBP14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Polr2hQ923G2 150 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Mpped2Q9CZJ0 294 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 9230110F15RikQ9D262 117 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Klrc3Q9QXN7 221 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 March7Q9WV66 693 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Gm3839S4R1W1 333 aa14.65□□□□□ -0.06
Shh-201ENSMUST00000002708 Igkv6-32A0A140T8N9 115 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 A0A1L1SV24 88 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 Birc7A2AWP0 285 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr747E9PXH6 313 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 Olfr749E9Q438 313 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 Slc18a3O35304 530 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 Hyal2O35632 473 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 Klk1b3P00756 261 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 Ier2P17950 221 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 LtbP41155 306 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 BidP70444 195 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 Slc25a33Q3TZX3 320 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 SrmsQ62270 496 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 P4ha3Q6W3F0 542 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 Ppp1r3bQ8C767 284 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 BivmQ8CBX9 502 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 Krtcap3Q8K177 240 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 Cbr3Q8K354 277 aa14.64□□□□□ -0.07
Shh-201ENSMUST00000002708 Il34Q8R1R4 235 aa14.64□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms