RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 IGKV1-9A0A0C4DH69 117 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 LOC100289279A0A1B0GTE1 492 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 MAGEB3O15480 346 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 UPK1BO75841 260 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 ALX3O95076 343 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 IGKV3-15P01624 115 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 HCKP08631 526 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 OCMP0CE72 109 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-221ENST00000641573 PSMB1P20618 241 aaKnown RBP11.3□□□□□ -0.6
PHGDH-221ENST00000641573 AZGP1P25311 298 aaKnown RBP11.3□□□□□ -0.6
PHGDH-221ENST00000641573 PTBP1P26599 531 aaKnown RBP eCLIP11.3□□□□□ -0.6
PHGDH-221ENST00000641573 POU3F4P49335 361 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 IFITM3Q01628 133 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 IL18Q14116 193 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 GK2Q14410 553 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-221ENST00000641573 OR8B8Q15620 311 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 UBE2V2Q15819 145 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 C2orf76Q3KRA6 126 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 PYDC2Q56P42 97 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 RFPL4BQ6ZWI9 263 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 MRPL21Q7Z2W9 205 aaKnown RBP11.3□□□□□ -0.6
PHGDH-221ENST00000641573 MRGPRGQ86SM5 289 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 LIX1LQ8IVB5 337 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 CDH26Q8IXH8 852 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 CMTM4Q8IZR5 234 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 OR4D6Q8NGJ1 314 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 OR5L1Q8NGL2 311 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 SYNPRQ8TBG9 265 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 ITLN2Q8WWU7 325 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-221ENST00000641573 SLC25A38Q96DW6 304 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 SORCS2Q96PQ0 1159 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 VKORC1Q9BQB6 163 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 UQCC2Q9BRT2 126 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 CCDC32Q9BV29 185 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 REPIN1Q9BWE0 567 aaKnown RBP11.3□□□□□ -0.6
PHGDH-221ENST00000641573 METTL17Q9H7H0 456 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-221ENST00000641573 PPP1R3EQ9H7J1 279 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 CNTD2Q9H8S5 307 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 GPR173Q9NS66 373 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 TBCCD1Q9NVR7 557 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 EIF3KQ9UBQ5 218 aaKnown RBP11.3□□□□□ -0.6
PHGDH-221ENST00000641573 MEMO1Q9Y316 297 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 RHBDD3Q9Y3P4 386 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 SLC25A15Q9Y619 301 aa11.3□□□□□ -0.6
PHGDH-221ENST00000641573 PKDREJQ9NTG1 2253 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 ANKHD1Q8IWZ3 2542 aaKnown RBP11.29□□□□□ -0.6
PHGDH-221ENST00000641573 ZNF93P35789 620 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-221ENST00000641573 CA7P43166 264 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 ART1P52961 327 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 PLA2G7Q13093 441 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 HLXQ14774 488 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-221ENST00000641573 ZNF181Q2M3W8 571 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 TIMM23BQ5SRD1 257 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 CLVS2Q5SYC1 327 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 ZBTB37Q5TC79 503 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 TMEM42Q69YG0 159 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 MTFR2Q6P444 385 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 RNF144BQ7Z419 303 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 ZNF101Q8IZC7 436 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 OR8H2Q8N162 312 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 ZNF808Q8N4W9 903 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-221ENST00000641573 GDPD1Q8N9F7 314 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 RELL2Q8NC24 303 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-221ENST00000641573 STEAP2Q8NFT2 490 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 RND1Q92730 232 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 S100PBPQ96BU1 408 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 ABCG5Q9H222 651 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 OR51B6Q9H340 312 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 KCNK15Q9H427 330 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 OPA3Q9H6K4 179 aa11.29□□□□□ -0.6
PHGDH-221ENST00000641573 A0A0G2JMP0 313 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 A0A0X1KG70 313 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 ZNF816-ZNF321PA0A0X1KG74 233 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 TMEM272A0A1B0GTI8 110 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 GGT3PA6NGU5 568 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 J3QW42 95 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 GMDSO60547 372 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 ICMTO60725 284 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 SMPD2O60906 423 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 IGLV1-44P01699 117 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 ARSBP15848 533 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 PITPNBP48739 271 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 CAPZA1P52907 286 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 FAM27E3Q08E93 113 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 RIN1Q13671 783 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 CNN3Q15417 329 aaKnown RBP11.28□□□□□ -0.6
PHGDH-221ENST00000641573 DMRTC1Q5HYR2 192 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 BAIAP2L2Q6UXY1 529 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 FAM169BQ8N8A8 192 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 OR4M2Q8NGB6 313 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 OR56B2PQ8NGI1 322 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 NPRL2Q8WTW4 380 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 RAB40AQ8WXH6 277 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 PIGCQ92535 297 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 PIGTQ969N2 578 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 ITFG2Q969R8 447 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 S100A16Q96FQ6 103 aaKnown RBP11.28□□□□□ -0.6
PHGDH-221ENST00000641573 SPACA5Q96QH8 159 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 GPER1Q99527 375 aa11.28□□□□□ -0.6
PHGDH-221ENST00000641573 ACTR6Q9GZN1 396 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms