RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 CDC42EP2O14613 210 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 WBP4O75554 376 aaKnown RBP5.55□□□□□ -1.52
RTTN-215ENST00000639487 KNG1P01042 644 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 CD40P25942 277 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 HSD11B1P28845 292 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 S100A7P31151 101 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 DNASE1L1P49184 302 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 SNRPD2P62316 118 aaKnown RBP5.55□□□□□ -1.52
RTTN-215ENST00000639487 RBX1P62877 108 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 KRR1Q13601 381 aaKnown RBP5.55□□□□□ -1.52
RTTN-215ENST00000639487 ZNF846Q147U1 533 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 ARL6IP1Q15041 203 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 TSTQ16762 297 aaKnown RBP5.55□□□□□ -1.52
RTTN-215ENST00000639487 NDUFAF6Q330K2 333 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 CCDC103Q8IW40 242 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 C19orf18Q8NEA5 215 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 NUDT10Q8NFP7 164 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 S100PBPQ96BU1 408 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 FOXB1Q99853 325 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 RBM24Q9BX46 236 aaKnown RBP5.55□□□□□ -1.52
RTTN-215ENST00000639487 COPZ2Q9P299 210 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 RPS6KB2Q9UBS0 482 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 MRM2Q9UI43 246 aaKnown RBP5.55□□□□□ -1.52
RTTN-215ENST00000639487 ETV7Q9Y603 341 aa5.55□□□□□ -1.52
RTTN-215ENST00000639487 TRBV4-1A0A0J9YWV2 114 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 A0A1B0GTI1 187 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 HLA-DQB1P01920 261 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 SLC6A1P30531 599 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 IDH3GP51553 393 aaPredicted RBP5.54□□□□□ -1.52
RTTN-215ENST00000639487 PIGFQ07326 219 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 CNN3Q15417 329 aaKnown RBP5.54□□□□□ -1.52
RTTN-215ENST00000639487 DDI2Q5TDH0 399 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 ZNF774Q6NX45 483 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 ZNF767PQ75MW2 155 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 DOK3Q7L591 496 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 POC5Q8NA72 575 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.54□□□□□ -1.52
RTTN-215ENST00000639487 C10orf105Q8TEF2 133 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 ZNF479Q96JC4 524 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 ZNF582Q96NG8 517 aaPredicted RBP5.54□□□□□ -1.52
RTTN-215ENST00000639487 C2orf88Q9BSF0 95 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 NDRG3Q9UGV2 375 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 RNF115Q9Y4L5 304 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 WIPI2Q9Y4P8 454 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 NUBP2Q9Y5Y2 271 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 CIB4A0PJX0 185 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 SAP18O00422 153 aaKnown RBP5.54□□□□□ -1.52
RTTN-215ENST00000639487 SOCS2O14508 198 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 ZNF780AO75290 641 aaPredicted RBP5.54□□□□□ -1.52
RTTN-215ENST00000639487 UCHL1P09936 223 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 PTNP21246 168 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 EFNA4P52798 201 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 EXOC3L2Q2M3D2 409 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 AGAP6Q5VW22 663 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 C3P1Q6ZMU1 363 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 CCDC71Q8IV32 467 aaPredicted RBP5.54□□□□□ -1.52
RTTN-215ENST00000639487 OR13C2Q8NGS9 318 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 OR14K1Q8NGZ2 314 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 OR1F12Q8NHA8 337 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 PCNPQ8WW12 178 aaKnown RBP5.54□□□□□ -1.52
RTTN-215ENST00000639487 NSMAFQ92636 917 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 RNF31Q96EP0 1072 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 GPA33Q99795 319 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 ATF6BQ99941 703 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 APOL4Q9BPW4 351 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 MEGF9Q9H1U4 602 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 AKIP1Q9NQ31 210 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 NANSQ9NR45 359 aa5.54□□□□□ -1.52
RTTN-215ENST00000639487 ANK3Q12955 4377 aaKnown RBP5.54□□□□□ -1.52
RTTN-215ENST00000639487 C17orf98A8MV24 154 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 ODF3BA8MYP8 253 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 M0R082 166 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 SULT1C2O00338 296 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 GASTP01350 101 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 IFNA6P05013 189 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 S100A8P05109 93 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 SERPIND1P05546 499 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 GTF2E2P29084 291 aaKnown RBP5.53□□□□□ -1.52
RTTN-215ENST00000639487 MTPNP58546 118 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 TAS2R41P59536 307 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 EIF4EBP1Q13541 118 aaPredicted RBP5.53□□□□□ -1.52
RTTN-215ENST00000639487 PDCD1Q15116 288 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 MED22Q15528 200 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 TIMM50Q3ZCQ8 353 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 CYP2R1Q6VVX0 501 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 SMIM15Q7Z3B0 74 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 GPAT4Q86UL3 456 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 MFSD4AQ8N468 514 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 OR8G5Q8NG78 346 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 OR14L1PQ8NHC6 308 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 ZNF417Q8TAU3 575 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 PHOSPHO1Q8TCT1 267 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 SFT2D1Q8WV19 159 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 CYGBQ8WWM9 190 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 ASB13Q8WXK3 278 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 YIPF6Q96EC8 236 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 RHOVQ96L33 236 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 PGLYRP3Q96LB9 341 aa5.53□□□□□ -1.52
RTTN-215ENST00000639487 ZNF587Q96SQ5 575 aaPredicted RBP5.53□□□□□ -1.52
RTTN-215ENST00000639487 NIPSNAP1Q9BPW8 284 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms